RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TMEM63BQ5T3F8 832 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 ARHGEF16Q5VV41 709 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 TLK2Q86UE8 772 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 ZSWIM6Q9HCJ5 1215 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 PXMP2Q9NR77 195 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 A0A1W2PQ45 241 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-203ENST00000462700 A0A1W2PQY0 241 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 MOXD2PA6NHM9 499 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 CTAGE5O15320 804 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 EIF2AK2P19525 551 aaKnown RBP21.77■■□□□ 1.08
COL9A3-203ENST00000462700 PTGS1P23219 599 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 ACLYP53396 1101 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 KCNA10Q16322 511 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 SLC39A5Q6ZMH5 540 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 RUFY3Q7L099 469 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 NAP1L2Q9ULW6 460 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-203ENST00000462700 Q9Y3F1 56 aa21.77■■□□□ 1.08
COL9A3-203ENST00000462700 CNTNAP5Q8WYK1 1306 aa21.77■■□□□ 1.07
COL9A3-203ENST00000462700 hCG_1642624A0A1W2PR95 340 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 RTP1P59025 263 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 SNX17Q15036 470 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 DUSP28Q4G0W2 176 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 PCSK9Q8NBP7 692 aaKnown RBP21.76■■□□□ 1.07
COL9A3-203ENST00000462700 WDR11Q9BZH6 1224 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 TM6SF1Q9BZW5 370 aa21.76■■□□□ 1.07
COL9A3-203ENST00000462700 FAM217BQ9NTX9 383 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-203ENST00000462700 DYNC1LI2O43237 492 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-203ENST00000462700 CDC27P30260 824 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 METAP2P50579 478 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL9A3-203ENST00000462700 FUT2Q10981 343 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 STXBP2Q15833 593 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 GNASQ5JWF2 1037 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 SCFD2Q8WU76 684 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 AP5M1Q9H0R1 490 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 CYP46A1Q9Y6A2 500 aa21.75■■□□□ 1.07
COL9A3-203ENST00000462700 NID2Q14112 1375 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 ASGR1P07306 291 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 NR3C2P08235 984 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 BEX3Q00994 111 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 PPP2R5BQ15173 497 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 C1orf53Q5VUE5 145 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 PDCD2LQ9BRP1 358 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 ZMYND8Q9ULU4 1186 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-203ENST00000462700 DNAH12Q6ZR08 3092 aa21.74■■□□□ 1.07
COL9A3-203ENST00000462700 BAZ2BQ9UIF8 2168 aaKnown RBP21.73■■□□□ 1.07
COL9A3-203ENST00000462700 ADD1P35611 737 aaKnown RBP21.73■■□□□ 1.07
COL9A3-203ENST00000462700 FSCN1Q16658 493 aaKnown RBP21.73■■□□□ 1.07
COL9A3-203ENST00000462700 TRIM60Q495X7 471 aa21.73■■□□□ 1.07
COL9A3-203ENST00000462700 FCHSD1Q86WN1 690 aa21.73■■□□□ 1.07
COL9A3-203ENST00000462700 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
COL9A3-203ENST00000462700 STARD7Q9NQZ5 370 aa21.73■■□□□ 1.07
COL9A3-203ENST00000462700 ATP11BQ9Y2G3 1177 aa21.73■■□□□ 1.07
COL9A3-203ENST00000462700 CCDC196A0A1B0GTZ2 297 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 PIK3CDO00329 1044 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 NKRFO15226 690 aaKnown RBP eCLIP21.72■■□□□ 1.07
COL9A3-203ENST00000462700 EIF5BO60841 1220 aaKnown RBP21.72■■□□□ 1.07
COL9A3-203ENST00000462700 EIF3JO75822 258 aaKnown RBP21.72■■□□□ 1.07
COL9A3-203ENST00000462700 SYN1P17600 705 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 EVCP57679 992 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 TOB2Q14106 344 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-203ENST00000462700 TTLL4Q14679 1199 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 PGM5Q15124 567 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 HEATR3Q7Z4Q2 680 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 GLT1D1Q96MS3 346 aa21.72■■□□□ 1.07
COL9A3-203ENST00000462700 MEIS2O14770 477 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 ARIH2O95376 493 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 TXNP10599 105 aaKnown RBP21.71■■□□□ 1.07
COL9A3-203ENST00000462700 ANAPC15P60006 121 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 CCDC62Q6P9F0 684 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 SEPT14Q6ZU15 432 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 OR6J1Q8NGC5 347 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 IL31RAQ8NI17 732 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 SMARCC2Q8TAQ2 1214 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 GPKOWQ92917 476 aaPredicted RBP eCLIP21.71■■□□□ 1.07
COL9A3-203ENST00000462700 CUL5Q93034 780 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 V9GY48 417 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-203ENST00000462700 ELP1O95163 1332 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 FRMPD4Q14CM0 1322 aa21.71■■□□□ 1.07
COL9A3-203ENST00000462700 ZEB2O60315 1214 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 MYCLP12524 364 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-203ENST00000462700 WWC2Q6AWC2 1192 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 CHRDL2Q6WN34 429 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 VSIG10LQ86VR7 867 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 COPS5Q92905 334 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 PSTPIP2Q9H939 334 aa21.7■■□□□ 1.06
COL9A3-203ENST00000462700 PDIA3P30101 505 aaKnown RBP21.69■■□□□ 1.06
COL9A3-203ENST00000462700 CCND2P30279 289 aa21.69■■□□□ 1.06
COL9A3-203ENST00000462700 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
COL9A3-203ENST00000462700 COLQQ9Y215 455 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-203ENST00000462700 hCG_1984214I3L0E3 225 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 CABYRO75952 493 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 RGS20O76081 388 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 SEC24BO95487 1268 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 CPT1AP50416 773 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 TLE2Q04725 743 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 LY6KQ17RY6 165 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 PPP1R18Q6NYC8 613 aa21.68■■□□□ 1.06
COL9A3-203ENST00000462700 CXCL17Q6UXB2 119 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms