RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 EIF2AK2P19525 551 aaKnown RBP21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 RPS6KB1P23443 525 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 IRX5P78411 483 aaPredicted RBP21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 BEX3Q00994 111 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 RTN1Q16799 776 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 GNASQ5JWF2 1037 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 WDR11Q9BZH6 1224 aa21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 MAP3K20Q9NYL2 800 aaKnown RBP21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 GNEQ9Y223 722 aaKnown RBP21.41■■□□□ 1.02
CDKN1A-206ENST00000462537 PTGS1P23219 599 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 CST5P28325 142 aaPredicted RBP21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 APOBRQ0VD83 1088 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 TMEM63BQ5T3F8 832 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 CHRDL2Q6WN34 429 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 BRF1Q92994 677 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 IWS1Q96ST2 819 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 PXMP2Q9NR77 195 aa21.4■■□□□ 1.02
CDKN1A-206ENST00000462537 hCG_1642624A0A1W2PR95 340 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 ASGR1P07306 291 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 GHRHRQ02643 423 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 PPP2R5BQ15173 497 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 STXBP2Q15833 593 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 TRIM60Q495X7 471 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 DUSP28Q4G0W2 176 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 CCSAPQ6IQ19 270 aaPredicted RBP21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 FCHSD1Q86WN1 690 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 SCFD2Q8WU76 684 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 VTI1AQ96AJ9 217 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 STARD7Q9NQZ5 370 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 Q9Y3F1 56 aa21.39■■□□□ 1.01
CDKN1A-206ENST00000462537 RBM47A0AV96 593 aaKnown RBP21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 FSCN1Q16658 493 aaKnown RBP21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 SEPT14Q6ZU15 432 aa21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 CUL5Q93034 780 aa21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 GLT1D1Q96MS3 346 aa21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 PRKAG2Q9UGJ0 569 aa21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 COLQQ9Y215 455 aaPredicted RBP21.38■■□□□ 1.01
CDKN1A-206ENST00000462537 CNTNAP5Q8WYK1 1306 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 CTAGE5O15320 804 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 ZEB2O60315 1214 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 NR3C2P08235 984 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 METAP2P50579 478 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 RUFY3Q7L099 469 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 HEATR3Q7Z4Q2 680 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 SMARCC2Q8TAQ2 1214 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 CYP46A1Q9Y6A2 500 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 KIAA1217Q5T5P2 1943 aa21.37■■□□□ 1.01
CDKN1A-206ENST00000462537 CEP290O15078 2479 aa21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.013e-7■■■□□ 18.5
CDKN1A-206ENST00000462537 TXNP10599 105 aaKnown RBP21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 RCAN1P53805 252 aa21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 SNX17Q15036 470 aa21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 PDCD2LQ9BRP1 358 aa21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 PRDM5Q9NQX1 630 aaPredicted RBP21.36■■□□□ 1.01
CDKN1A-206ENST00000462537 DNAH12Q6ZR08 3092 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 EIF3JO75822 258 aaKnown RBP21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 CDC27P30260 824 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 NKX3-2P78367 333 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 PGM5Q15124 567 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 C1orf53Q5VUE5 145 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 GPKOWQ92917 476 aaPredicted RBP eCLIP21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 ZSWIM6Q9HCJ5 1215 aa21.35■■□□□ 1.01
CDKN1A-206ENST00000462537 CCDC196A0A1B0GTZ2 297 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 PQBP1O60828 265 aaKnown RBP21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 CCND2P30279 289 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 CPT1AP50416 773 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 USP17L6PQ6QN14 398 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 CXCL17Q6UXB2 119 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 COPS5Q92905 334 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 PCDH10Q9P2E7 1040 aa21.34■■□□□ 1.01
CDKN1A-206ENST00000462537 ELP1O95163 1332 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 A0A0U1RQG5 324 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 EIF5BO60841 1220 aaKnown RBP21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 ARIH2O95376 493 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 TLE2Q04725 743 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 LY6KQ17RY6 165 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 BRDTQ58F21 947 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 FBXL16Q8N461 479 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 IL31RAQ8NI17 732 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 AGXT2Q9BYV1 514 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 TM6SF1Q9BZW5 370 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 PSTPIP2Q9H939 334 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 FAM217BQ9NTX9 383 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 MRVI1Q9Y6F6 885 aa21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 V9GY48 417 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-206ENST00000462537 CABYRO75952 493 aa21.32■■□□□ 1
CDKN1A-206ENST00000462537 MYL3P08590 195 aa21.32■■□□□ 1
CDKN1A-206ENST00000462537 ADD1P35611 737 aaKnown RBP21.32■■□□□ 1
CDKN1A-206ENST00000462537 MAGEA10P43363 369 aaPredicted RBP21.32■■□□□ 1
CDKN1A-206ENST00000462537 FUT2Q10981 343 aa21.32■■□□□ 1
CDKN1A-206ENST00000462537 HABP4Q5JVS0 413 aaKnown RBP21.32■■□□□ 1
CDKN1A-206ENST00000462537 WWC2Q6AWC2 1192 aa21.32■■□□□ 1
CDKN1A-206ENST00000462537 RBM27Q9P2N5 1060 aaKnown RBP21.32■■□□□ 1
CDKN1A-206ENST00000462537 MROH7Q68CQ1 1323 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms