RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.01□□□□□ -1.45
VPS41-210ENST00000462429 A0A1W2PQJ5 194 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 NOTOA8MTQ0 251 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 BIN1O00499 593 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 MSCO60682 206 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 PRKCAP17252 672 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 BCL6P41182 706 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 GUCY1A3Q02108 690 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 LSAMPQ13449 338 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 DALRD3Q5D0E6 543 aaKnown RBP6.01□□□□□ -1.45
VPS41-210ENST00000462429 BRAPQ7Z569 592 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 ATG4DQ86TL0 474 aaPredicted RBP6.01□□□□□ -1.45
VPS41-210ENST00000462429 LZTR1Q8N653 840 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 MFSD3Q96ES6 412 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 PLCD4Q9BRC7 762 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 SP110Q9HB58 689 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 TRIM39Q9HCM9 518 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 PDLIM7Q9NR12 457 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 BTG4Q9NY30 223 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS41-210ENST00000462429 MAGEC2Q9UBF1 373 aaPredicted RBP6.01□□□□□ -1.45
VPS41-210ENST00000462429 GULP1Q9UBP9 304 aa6.01□□□□□ -1.45
VPS41-210ENST00000462429 H7BY64 318 aa6□□□□□ -1.45
VPS41-210ENST00000462429 PSPNO60542 156 aa6□□□□□ -1.45
VPS41-210ENST00000462429 CRTAMO95727 393 aa6□□□□□ -1.45
VPS41-210ENST00000462429 TRHRP34981 398 aaPredicted RBP6□□□□□ -1.45
VPS41-210ENST00000462429 ARL4AP40617 200 aa6□□□□□ -1.45
VPS41-210ENST00000462429 CYP4F8P98187 520 aa6□□□□□ -1.45
VPS41-210ENST00000462429 MVKQ03426 396 aa6□□□□□ -1.45
VPS41-210ENST00000462429 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
VPS41-210ENST00000462429 NLRX1Q86UT6 975 aa6□□□□□ -1.45
VPS41-210ENST00000462429 USP33Q8TEY7 942 aa6□□□□□ -1.45
VPS41-210ENST00000462429 DPF3Q92784 378 aa6□□□□□ -1.45
VPS41-210ENST00000462429 TMEM169Q96HH4 297 aa6□□□□□ -1.45
VPS41-210ENST00000462429 KIRREL1Q96J84 757 aa6□□□□□ -1.45
VPS41-210ENST00000462429 CLUHP3Q96NS8 147 aa6□□□□□ -1.45
VPS41-210ENST00000462429 CRTAC1Q9NQ79 661 aa6□□□□□ -1.45
VPS41-210ENST00000462429 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
VPS41-210ENST00000462429 MARCH2Q9P0N8 246 aa6□□□□□ -1.45
VPS41-210ENST00000462429 WDR3Q9UNX4 943 aaKnown RBP eCLIP6□□□□□ -1.45
VPS41-210ENST00000462429 RWDD3Q9Y3V2 267 aa6□□□□□ -1.45
VPS41-210ENST00000462429 PRKAB1Q9Y478 270 aa6□□□□□ -1.45
VPS41-210ENST00000462429 SBNO2Q9Y2G9 1366 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 B4E1Z4 1266 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 FUCA1P04066 466 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 PNLIPP16233 465 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 GRK2P25098 689 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 GRK3P35626 688 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 PAK1Q13153 545 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 TIGD5Q53EQ6 642 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 RNF187Q5TA31 235 aaPredicted RBP5.99□□□□□ -1.45
VPS41-210ENST00000462429 CBLL1Q75N03 491 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 CEP68Q76N32 757 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 CABP7Q86V35 215 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 DHX37Q8IY37 1157 aaKnown RBP5.99□□□□□ -1.45
VPS41-210ENST00000462429 TRMT2BQ96GJ1 504 aaKnown RBP5.99□□□□□ -1.45
VPS41-210ENST00000462429 CLDND1Q9NY35 253 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 ADGRE2Q9UHX3 823 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 COA3Q9Y2R0 106 aaPredicted RBP5.99□□□□□ -1.45
VPS41-210ENST00000462429 PCDHA9Q9Y5H5 950 aa5.99□□□□□ -1.45
VPS41-210ENST00000462429 C22orf46C9J442 243 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 FAM47E-STBD1D6RA91 191 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 ARVCFO00192 962 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 IRS4O14654 1257 aaPredicted RBP5.98□□□□□ -1.45
VPS41-210ENST00000462429 OPA1O60313 960 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 RASGRP1O95267 797 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 SOD2P04179 222 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 ASLP04424 464 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 TACR1P25103 407 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 IGFALSP35858 605 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 FLT3P36888 993 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 BICRALQ6AI39 1079 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 FGD2Q7Z6J4 655 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 TEX2Q8IWB9 1127 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 ZC3H7AQ8IWR0 971 aaKnown RBP5.98□□□□□ -1.45
VPS41-210ENST00000462429 Q8N1Y9 231 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 Q8N3U1 123 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 SCLYQ96I15 445 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 MTA3Q9BTC8 594 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 FBXL7Q9UJT9 491 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 PCDHA8Q9Y5H6 950 aa5.98□□□□□ -1.45
VPS41-210ENST00000462429 TCRBV16S1A1N1A0A5B0 115 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 GSTA4O15217 222 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 PPP1R11O60927 126 aaPredicted RBP5.97□□□□□ -1.45
VPS41-210ENST00000462429 DNAJC8O75937 253 aaPredicted RBP5.97□□□□□ -1.45
VPS41-210ENST00000462429 MSL3P1P0C860 447 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 SDSP20132 328 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 FPR2P25090 351 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 KIR3DS1Q14943 382 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 TM4SF20Q53R12 229 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 FAM47CQ5HY64 1035 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 MROH9Q5TGP6 573 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 NLRP10Q86W26 655 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 SIRT2Q8IXJ6 389 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 PLEKHO2Q8TD55 490 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 PANK1Q8TE04 598 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 SHISA4Q96DD7 197 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 RNF32Q9H0A6 362 aa5.97□□□□□ -1.45
VPS41-210ENST00000462429 YBX2Q9Y2T7 364 aaKnown RBP5.97□□□□□ -1.45
VPS41-210ENST00000462429 TNPO3Q9Y5L0 923 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms