RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ATAD5Q96QE3 1844 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 ALX3O95076 343 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 IFIT2P09913 472 aaKnown RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 MX1P20591 662 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 DLGAP5Q15398 846 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 TTC39AQ5SRH9 613 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 SPTY2D1Q68D10 685 aaPredicted RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 CDC37L1Q7L3B6 337 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 C16orf71Q8IYS4 520 aaPredicted RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 HHIPL1Q96JK4 782 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 RIOK1Q9BRS2 568 aaKnown RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 ZNF70Q9UC06 446 aaPredicted RBP6.97□□□□□ -1.29
VPS36-202ENST00000462289 JAG2Q9Y219 1238 aa6.97□□□□□ -1.29
VPS36-202ENST00000462289 DOCK1Q14185 1865 aa6.96□□□□□ -1.29
VPS36-202ENST00000462289 MYH8P13535 1937 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 GLRX3O76003 335 aaKnown RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 HSPA6P17066 643 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 ADD2P35612 726 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 FKBP1BP68106 108 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 ATP11AP98196 1134 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 CHAF1AQ13111 956 aaPredicted RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 TTF1Q15361 905 aaPredicted RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 UBE3CQ15386 1083 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 ANGEL2Q5VTE6 544 aaKnown RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 MAP1SQ66K74 1059 aaPredicted RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 CDC42EP5Q6NZY7 148 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 ERICH6Q7L0X2 663 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 NBPF11Q86T75 865 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 APOBEC3FQ8IUX4 373 aaKnown RBP6.96□□□□□ -1.3
VPS36-202ENST00000462289 DNAJC5GQ8N7S2 189 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 GPR152Q8TDT2 470 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 ZMYND15Q9H091 742 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 PAG1Q9NWQ8 432 aa6.96□□□□□ -1.3
VPS36-202ENST00000462289 RASSF10A6NK89 507 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 ENTPD3O75355 529 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS36-202ENST00000462289 CENPBP07199 599 aaPredicted RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 PDE6AP16499 860 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 IRX6P78412 446 aaPredicted RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 GSTO1P78417 241 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 GORABQ5T7V8 394 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 ANKRD45Q5TZF3 282 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 CENPQQ7L2Z9 268 aaPredicted RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 KRT26Q7Z3Y9 468 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 KRTAP1-3Q8IUG1 177 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 CEP120Q8N960 986 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 EDC3Q96F86 508 aaKnown RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 GLIS2Q9BZE0 524 aaPredicted RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 DEFB129Q9H1M3 183 aa6.95□□□□□ -1.3
VPS36-202ENST00000462289 TDRD3Q9H7E2 651 aaKnown RBP6.95□□□□□ -1.3
VPS36-202ENST00000462289 ADM5C9JUS6 153 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 LINC01387J3KSC0 135 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 TRAF5O00463 557 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 ERC2O15083 957 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 FRAT2O75474 233 aaPredicted RBP6.94□□□□□ -1.3
VPS36-202ENST00000462289 LDHCP07864 332 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 FSTP19883 344 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 SCNN1AP37088 669 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS36-202ENST00000462289 MAP3K12Q12852 859 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 NFIAQ12857 509 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 TNFAIP1Q13829 316 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
VPS36-202ENST00000462289 CEP135Q66GS9 1140 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 FAM151AQ8WW52 585 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 DCPSQ96C86 337 aaKnown RBP6.94□□□□□ -1.3
VPS36-202ENST00000462289 CDCA5Q96FF9 252 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 RASSF4Q9H2L5 321 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 BOLA2Q9H3K6 86 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 DDX4Q9NQI0 724 aaKnown RBP6.94□□□□□ -1.3
VPS36-202ENST00000462289 ABCF2Q9UG63 623 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 LOC285556D6RIA3 1793 aa6.94□□□□□ -1.3
VPS36-202ENST00000462289 TMEM88BA6NKF7 163 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 F8W031 263 aaPredicted RBP6.93□□□□□ -1.3
VPS36-202ENST00000462289 GOLIM4O00461 696 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 FOXP2O15409 715 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 MYO1BO43795 1136 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 CHGBP05060 677 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 ZFYP08048 801 aaPredicted RBP6.93□□□□□ -1.3
VPS36-202ENST00000462289 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
VPS36-202ENST00000462289 CDC27P30260 824 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms