RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 DCDC2CA8MYV0 355 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 SH2B2O14492 632 aaPredicted RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 NKRFO15226 690 aaKnown RBP eCLIP10.23□□□□□ -0.77
SYN3-207ENST00000462268 DYNC1LI2O43237 492 aaPredicted RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 PQBP1O60828 265 aaKnown RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 CLTBP09497 229 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 CALM1P0DP23 149 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 CALM2P0DP24 149 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 CALM3P0DP25 149 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 LIFRP42702 1097 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 GNAQP50148 359 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 TLE2Q04725 743 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 PPP2R5BQ15173 497 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 FSCN1Q16658 493 aaKnown RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 DUSP28Q4G0W2 176 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 ANKRD33Q7Z3H0 272 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 HOMER1Q86YM7 354 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 SYTL5Q8TDW5 730 aaPredicted RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 SCFD2Q8WU76 684 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 RIOX1Q9H6W3 641 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 PDGFCQ9NRA1 345 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 PCDHA1Q9Y5I3 950 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 RANBP2P49792 3224 aaKnown RBP10.23□□□□□ -0.77
SYN3-207ENST00000462268 CEP290O15078 2479 aa10.23□□□□□ -0.77
SYN3-207ENST00000462268 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
SYN3-207ENST00000462268 CTAGE5O15320 804 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
SYN3-207ENST00000462268 CFBP00751 764 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 CPT1AP50416 773 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 HSD17B4P51659 736 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 GHRHRQ02643 423 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 KRT32Q14532 448 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 BRDTQ58F21 947 aaPredicted RBP10.22□□□□□ -0.77
SYN3-207ENST00000462268 ARHGEF16Q5VV41 709 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 PIGSQ96S52 555 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 RMDN3Q96TC7 470 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 SPZ1Q9BXG8 430 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
SYN3-207ENST00000462268 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
SYN3-207ENST00000462268 ARVCFO00192 962 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 KIAA0355O15063 1070 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 CYTH3O43739 400 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
SYN3-207ENST00000462268 RAG1P15918 1043 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 BEX3Q00994 111 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 STXBP2Q15833 593 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 LRIT3Q3SXY7 679 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 OR6J1Q8NGC5 347 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 RRP36Q96EU6 259 aaKnown RBP10.21□□□□□ -0.77
SYN3-207ENST00000462268 NEK1Q96PY6 1258 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 TAAR1Q96RJ0 339 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 MYL10Q9BUA6 226 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 TMEM39AQ9NV64 488 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
SYN3-207ENST00000462268 TRIM43BA6NCK2 446 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 GCOM1H8Y6P7 765 aaPredicted RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 OPLAHO14841 1288 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 REC8O95072 547 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 POLR2MP0CAP2 368 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 TXNP10599 105 aaKnown RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 SLC35G1Q2M3R5 365 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 ERICH6BQ5W0A0 696 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 SGMS1Q86VZ5 419 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 TBC1D5Q92609 795 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 BADQ92934 168 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 TRIM43Q96BQ3 446 aaPredicted RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
SYN3-207ENST00000462268 PXMP2Q9NR77 195 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 PLXNA1Q9UIW2 1896 aa10.2□□□□□ -0.78
SYN3-207ENST00000462268 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
SYN3-207ENST00000462268 KPNA6O60684 536 aa10.19□□□□□ -0.78
SYN3-207ENST00000462268 EIF3JO75822 258 aaKnown RBP10.19□□□□□ -0.78
SYN3-207ENST00000462268 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
SYN3-207ENST00000462268 NR3C2P08235 984 aa10.19□□□□□ -0.78
SYN3-207ENST00000462268 CDK7P50613 346 aa10.19□□□□□ -0.78
SYN3-207ENST00000462268 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms