RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MEIS2O14770 477 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 SNAI1O95863 264 aaPredicted RBP13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 MYCP01106 439 aaPredicted RBP13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 GJB1P08034 283 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 WASF1Q92558 559 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 VTA1Q9NP79 307 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 RIC8AQ9NPQ8 531 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 SH3GLB2Q9NR46 395 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
TRAF3IP1-204ENST00000462122 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SEPT4O43236 478 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 XBP1P17861 261 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 GNA11P29992 359 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CCND3P30281 292 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ADCY7P51828 1080 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PDE4DQ08499 809 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TRPV1Q8NER1 839 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 LCTP09848 1927 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SPDYE3A6NKU9 549 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 AKR1A1P14550 325 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CNGA1P29973 690 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 GJA8P48165 433 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 AP3B2Q13367 1082 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 STXBP2Q15833 593 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 MCTP2Q6DN12 878 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 NSUN7Q8NE18 718 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PDCD2LQ9BRP1 358 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ORC3Q9UBD5 711 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FAM184BQ9ULE4 1060 aa13.38□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SGPL1O95470 568 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FOSP01100 380 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 NR3C2P08235 984 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 UBE2SQ16763 222 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 GALNT17Q6IS24 598 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 XRRA1Q6P2D8 792 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
TRAF3IP1-204ENST00000462122 JAK2O60674 1132 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 STAM2O75886 525 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 RARBP10826 455 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CCND2P30279 289 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 NLRP5P59047 1200 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PGM5Q15124 567 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 LHX8Q68G74 356 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 EEPD1Q7L9B9 569 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 VSIG10LQ86VR7 867 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PCDHA6Q9UN73 950 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PCDHA8Q9Y5H6 950 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 LRRC37A2A6NM11 1700 aa13.36□□□□□ -0.27
TRAF3IP1-204ENST00000462122 RBM47A0AV96 593 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SOX10P56693 466 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 CCDC144BQ3MJ40 725 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PCNX4Q63HM2 1172 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TAPT1Q6NXT6 567 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 DAGLBQ8NCG7 672 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 SCFD2Q8WU76 684 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 AIFM3Q96NN9 605 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 ANO3Q9BYT9 981 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP1-204ENST00000462122 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP1-204ENST00000462122 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms