RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 FZD1Q9UP38 647 aa28.65■■■□□ 2.18
CDH23-208ENST00000461841 PPP1R3GB7ZBB8 358 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 TPM3P06753 285 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 CLCN1P35523 988 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 MTMR2Q13614 643 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 LDHDQ86WU2 507 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 IFNKQ9P0W0 207 aa28.64■■■□□ 2.18
CDH23-208ENST00000461841 MARCH6O60337 910 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 CFBP00751 764 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 GRB10Q13322 594 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 TRMT44Q8IYL2 757 aaKnown RBP28.64■■■□□ 2.17
CDH23-208ENST00000461841 XPO4Q9C0E2 1151 aaKnown RBP28.64■■■□□ 2.17
CDH23-208ENST00000461841 RMND1Q9NWS8 449 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 RNF181Q9P0P0 153 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 MRPL11Q9Y3B7 192 aaKnown RBP28.64■■■□□ 2.17
CDH23-208ENST00000461841 PPP2R3BQ9Y5P8 575 aa28.64■■■□□ 2.17
CDH23-208ENST00000461841 FANCCQ00597 558 aa28.63■■■□□ 2.17
CDH23-208ENST00000461841 CCDC186Q7Z3E2 898 aa28.63■■■□□ 2.17
CDH23-208ENST00000461841 SLF1Q9BQI6 1058 aa28.63■■■□□ 2.17
CDH23-208ENST00000461841 EMILIN3Q9NT22 766 aa28.63■■■□□ 2.17
CDH23-208ENST00000461841 NFE2L3Q9Y4A8 694 aa28.63■■■□□ 2.17
CDH23-208ENST00000461841 YBX3P16989 372 aaKnown RBP eCLIP28.62■■■□□ 2.17
CDH23-208ENST00000461841 PTGS1P23219 599 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 SPP2Q13103 211 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 FCHSD1Q86WN1 690 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 PNMA5Q96PV4 448 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 NUDT12Q9BQG2 462 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 WDR18Q9BV38 432 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 DOCK1Q14185 1865 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 FAM86B1E9PN63 330 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 FAM86B2P0C5J1 330 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 Q4G0T1 1027 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 KCNF1Q9H3M0 494 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 ZNF536O15090 1300 aa28.62■■■□□ 2.17
CDH23-208ENST00000461841 GCOM1H8Y6P7 765 aaPredicted RBP28.61■■■□□ 2.17
CDH23-208ENST00000461841 ICAM1P05362 532 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 POLR2MP0CAP2 368 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 PTPRAP18433 802 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 VCAM1P19320 739 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 CIITAP33076 1130 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 PRR16Q569H4 304 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 ZNF658Q5TYW1 1059 aaPredicted RBP28.61■■■□□ 2.17
CDH23-208ENST00000461841 KRT79Q5XKE5 535 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 LENG9Q96B70 501 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 ABCB11O95342 1321 aa28.61■■■□□ 2.17
CDH23-208ENST00000461841 CYP3A4P08684 503 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 CCDC144BQ3MJ40 725 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 KLHL10Q6JEL2 608 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 SNX29Q8TEQ0 813 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 KLRG1Q96E93 195 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 AGBL1Q96MI9 1066 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 UIMC1Q96RL1 719 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 KLRC4O43908 158 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 ZNF18P17022 549 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 USP14P54578 494 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 BACE1P56817 501 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 SLFN12Q8IYM2 578 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 ETNPPLQ8TBG4 499 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 TANGO6Q9C0B7 1094 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 PICK1Q9NRD5 415 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 BLOC1S4Q9NUP1 217 aa28.6■■■□□ 2.17
CDH23-208ENST00000461841 KCNB1Q14721 858 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 TRIM9Q9C026 710 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 STK17AQ9UEE5 414 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 POLR2AP24928 1970 aaKnown RBP28.59■■■□□ 2.17
CDH23-208ENST00000461841 SSC5DA1L4H1 1573 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 ZNF500O60304 480 aaPredicted RBP28.59■■■□□ 2.17
CDH23-208ENST00000461841 ZNF280CQ8ND82 737 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 CDK5RAP3Q96JB5 506 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 C7orf25Q9BPX7 421 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 CCPG1Q9ULG6 757 aa28.59■■■□□ 2.17
CDH23-208ENST00000461841 TBX3O15119 743 aa28.58■■■□□ 2.17
CDH23-208ENST00000461841 KMT5BQ4FZB7 885 aa28.58■■■□□ 2.17
CDH23-208ENST00000461841 PITPNM2Q9BZ72 1349 aa28.58■■■□□ 2.17
CDH23-208ENST00000461841 AS3MTQ9HBK9 375 aa28.58■■■□□ 2.17
CDH23-208ENST00000461841 ADARB2Q9NS39 739 aaKnown RBP28.58■■■□□ 2.17
CDH23-208ENST00000461841 FLOT1O75955 427 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SERPINC1P01008 464 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 AMPD3Q01432 767 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SUPT20HL1Q3ZLR7 823 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 HSP90AA4PQ58FG1 418 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 CYP2W1Q8TAV3 490 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 RPAP3Q9H6T3 665 aaPredicted RBP28.57■■■□□ 2.16
CDH23-208ENST00000461841 SLC38A10Q9HBR0 1119 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SAMSN1Q9NSI8 373 aaKnown RBP28.57■■■□□ 2.16
CDH23-208ENST00000461841 ZHX2Q9Y6X8 837 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 RHOBTB3O94955 611 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 STX17P56962 302 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SEMA3FQ13275 785 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 ECM1Q16610 540 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 TMEM119Q4V9L6 283 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SPATA1Q5VX52 437 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 GDAQ9Y2T3 454 aa28.57■■■□□ 2.16
CDH23-208ENST00000461841 SYNRGQ9UMZ2 1314 aa28.56■■■□□ 2.16
CDH23-208ENST00000461841 UBASH3AP57075 661 aa28.56■■■□□ 2.16
CDH23-208ENST00000461841 SV2BQ7L1I2 683 aa28.56■■■□□ 2.16
CDH23-208ENST00000461841 PPP1R9AQ9ULJ8 1098 aa28.56■■■□□ 2.16
CDH23-208ENST00000461841 DHX8Q14562 1220 aaKnown RBP28.55■■■□□ 2.16
CDH23-208ENST00000461841 C9orf131Q5VYM1 1079 aa28.55■■■□□ 2.16
CDH23-208ENST00000461841 LARP4BQ92615 738 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms