RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 USP49Q70CQ1 688 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 GRAMD1CQ8IYS0 662 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ANKRD35Q8N283 1001 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TNFRSF25Q93038 417 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ZBED3Q96IU2 234 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TRIM47Q96LD4 638 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 GSDMAQ96QA5 445 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 WDR18Q9BV38 432 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 WDR11Q9BZH6 1224 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 BLZF1Q9H2G9 400 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PPP1R9AQ9ULJ8 1098 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PITPNM2Q9BZ72 1349 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 LAMA4Q16363 1823 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 A0A087WWV3 80 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PP2D1A8MPX8 630 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 FGFR1OPO95684 399 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ICAM1P05362 532 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PTPRAP18433 802 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 EIF2AK2P19525 551 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 OSBPP22059 807 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 STX17P56962 302 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PDE4DQ08499 809 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 RRP1BQ14684 758 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 SLC35G1Q2M3R5 365 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PAXIP1Q6ZW49 1069 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 NLRX1Q86UT6 975 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ERO1BQ86YB8 467 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 CCDC65Q8IXS2 484 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ZNF526Q8TF50 670 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ZC3H15Q8WU90 426 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ATG4CQ96DT6 458 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PAGE5Q96GU1 130 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 FAM20AQ96MK3 541 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TEX13BQ9BXU2 312 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 CCSER1Q9C0I3 900 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 DNM3Q9UQ16 869 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 HPSEQ9Y251 543 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TESPA1A2RU30 521 aaPredicted RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 DDX39AO00148 427 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 MYL1P05976 194 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 CHD4Q14839 1912 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 GNPTABQ3T906 1256 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 PPP4R3AQ6IN85 833 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 CNNM4Q6P4Q7 775 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 C11orf57Q6ZUT1 292 aaPredicted RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 STXBP4Q6ZWJ1 553 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 NCAPG2Q86XI2 1143 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 C2orf69Q8N8R5 385 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 CDCA5Q96FF9 252 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 AGBL1Q96MI9 1066 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 TRERF1Q96PN7 1200 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 ZNF577Q9BSK1 485 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 TEKT3Q9BXF9 490 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 RTN4Q9NQC3 1192 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 FBXO40Q9UH90 709 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 MAN1B1Q9UKM7 699 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 SYNRGQ9UMZ2 1314 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 IVNS1ABPQ9Y6Y0 642 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 BICDL2A1A5D9 508 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 GLTPD2A6NH11 291 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 POTEMA6NI47 508 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 RPN1P04843 607 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 YBX3P16989 372 aaKnown RBP eCLIP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 STAT3P40763 770 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 UBASH3AP57075 661 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 JAG1P78504 1218 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 SETQ01105 290 aaPredicted RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 CYP4A11Q02928 519 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 NPY5RQ15761 445 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 HSP90AA4PQ58FG1 418 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 FASTKD5Q7L8L6 764 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 TRMT1LQ7Z2T5 733 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 PPFIBP1Q86W92 1011 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 SIAH1Q8IUQ4 282 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 FAM114A1Q8IWE2 563 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 LARP4BQ92615 738 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 KLRG1Q96E93 195 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 TEPSINQ96N21 525 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 RMDN3Q96TC7 470 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 RANBP17Q9H2T7 1088 aaKnown RBP4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 ACAD9Q9H845 621 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 PNMA3Q9UL41 463 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 CTNND2Q9UQB3 1225 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 NFE2L3Q9Y4A8 694 aa4.61□□□□□ -1.67
ATP13A3-206ENST00000461660 ZC3H4Q9UPT8 1303 aaKnown RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 MYH1P12882 1939 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ARHGEF35A5YM69 484 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 ESPNB1AK53 854 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 POTEB2H3BUK9 544 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 BACH1O14867 736 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 TBX3O15119 743 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PLA2G6O60733 806 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PPP1R11O60927 126 aaPredicted RBP4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CLSTN1O94985 981 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 FAM13AO94988 1023 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 SREBF1P36956 1147 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 SP4Q02446 784 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 PAK1Q13153 545 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 VGLL4Q14135 290 aa4.6□□□□□ -1.67
ATP13A3-206ENST00000461660 CEP55Q53EZ4 464 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms