RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 RAB11FIP4Q86YS3 637 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 SRBD1Q8N5C6 995 aaKnown RBP26.04■■□□□ 1.76
TRAF4-207ENST00000461195 JAKMIP1Q96N16 626 aaKnown RBP26.04■■□□□ 1.76
TRAF4-207ENST00000461195 IWS1Q96ST2 819 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 WDR11Q9BZH6 1224 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 SEC63Q9UGP8 760 aaKnown RBP26.04■■□□□ 1.76
TRAF4-207ENST00000461195 ATP11BQ9Y2G3 1177 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 DUSP28Q4G0W2 176 aa26.03■■□□□ 1.76
TRAF4-207ENST00000461195 CTAGE5O15320 804 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 DYNC1LI2O43237 492 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-207ENST00000461195 ASGR1P07306 291 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 FGD1P98174 961 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 TRIM60Q495X7 471 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 ARHGEF16Q5VV41 709 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 BLOC1S2Q6QNY1 142 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 CMTR1Q8N1G2 835 aaKnown RBP26.02■■□□□ 1.76
TRAF4-207ENST00000461195 STARD7Q9NQZ5 370 aa26.02■■□□□ 1.76
TRAF4-207ENST00000461195 GCOM1H8Y6P7 765 aaPredicted RBP26.01■■□□□ 1.75
TRAF4-207ENST00000461195 ZBTB43O43298 467 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 POLR2MP0CAP2 368 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 BEX3Q00994 111 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 FSCN1Q16658 493 aaKnown RBP26.01■■□□□ 1.75
TRAF4-207ENST00000461195 TMEM63BQ5T3F8 832 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 TMTC3Q6ZXV5 915 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 SCFD2Q8WU76 684 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 GLT1D1Q96MS3 346 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 PXMP2Q9NR77 195 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 BRPF3Q9ULD4 1205 aa26.01■■□□□ 1.75
TRAF4-207ENST00000461195 CPA1P15085 419 aa26■■□□□ 1.75
TRAF4-207ENST00000461195 EIF2AK2P19525 551 aaKnown RBP26■■□□□ 1.75
TRAF4-207ENST00000461195 PTGS1P23219 599 aa26■■□□□ 1.75
TRAF4-207ENST00000461195 PSMA5P28066 241 aa26■■□□□ 1.75
TRAF4-207ENST00000461195 HOXA13P31271 388 aaPredicted RBP26■■□□□ 1.75
TRAF4-207ENST00000461195 STXBP2Q15833 593 aa26■■□□□ 1.75
TRAF4-207ENST00000461195 RBM28Q9NW13 759 aaKnown RBP26■■□□□ 1.75
TRAF4-207ENST00000461195 ELP1O95163 1332 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 KIAA1217Q5T5P2 1943 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 KLF18A0A0U1RQI7 1052 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 ZEB2O60315 1214 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 PPP2R5BQ15173 497 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 USP26Q9BXU7 913 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 PRKAG2Q9UGJ0 569 aa25.99■■□□□ 1.75
TRAF4-207ENST00000461195 NKRFO15226 690 aaKnown RBP eCLIP25.98■■□□□ 1.752e-7■■□□□ 11.4
TRAF4-207ENST00000461195 NR3C2P08235 984 aa25.98■■□□□ 1.75
TRAF4-207ENST00000461195 RTN1Q16799 776 aa25.98■■□□□ 1.75
TRAF4-207ENST00000461195 Q6ZUG5 572 aa25.98■■□□□ 1.75
TRAF4-207ENST00000461195 CCDC82Q8N4S0 544 aa25.98■■□□□ 1.75
TRAF4-207ENST00000461195 VTI1AQ96AJ9 217 aa25.98■■□□□ 1.75
TRAF4-207ENST00000461195 A0A1W2PPC1 479 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 TXNP10599 105 aaKnown RBP25.97■■□□□ 1.75
TRAF4-207ENST00000461195 RPS6KB1P23443 525 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 MAGEA10P43363 369 aaPredicted RBP25.97■■□□□ 1.75
TRAF4-207ENST00000461195 RCAN1P53805 252 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 TLE2Q04725 743 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 TTLL4Q14679 1199 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 OR6J1Q8NGC5 347 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 GDF15Q99988 308 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 PDCD2LQ9BRP1 358 aa25.97■■□□□ 1.75
TRAF4-207ENST00000461195 LAMA3Q16787 3333 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 GOLGA8AA7E2F4 631 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 GOLGA8BA8MQT2 603 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 EIF3JO75822 258 aaKnown RBP25.96■■□□□ 1.75
TRAF4-207ENST00000461195 CABYRO75952 493 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 CASTP20810 708 aaKnown RBP25.96■■□□□ 1.75
TRAF4-207ENST00000461195 SEPT14Q6ZU15 432 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 FCHSD1Q86WN1 690 aa25.96■■□□□ 1.75
TRAF4-207ENST00000461195 NAP1L2Q9ULW6 460 aaPredicted RBP25.96■■□□□ 1.75
TRAF4-207ENST00000461195 A0A0U1RQG5 324 aaPredicted RBP25.95■■□□□ 1.74
TRAF4-207ENST00000461195 PQBP1O60828 265 aaKnown RBP25.95■■□□□ 1.74
TRAF4-207ENST00000461195 BMP8BP34820 402 aa25.95■■□□□ 1.74
TRAF4-207ENST00000461195 CXCL17Q6UXB2 119 aa25.95■■□□□ 1.74
TRAF4-207ENST00000461195 FBXL16Q8N461 479 aa25.95■■□□□ 1.74
TRAF4-207ENST00000461195 BRF1Q92994 677 aa25.95■■□□□ 1.74
TRAF4-207ENST00000461195 PRDM5Q9NQX1 630 aaPredicted RBP25.95■■□□□ 1.74
TRAF4-207ENST00000461195 hCG_1642624A0A1W2PR95 340 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 SOX1O00570 391 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-207ENST00000461195 ARIH2O95376 493 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 MYCLP12524 364 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-207ENST00000461195 CPT1AP50416 773 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 APOBRQ0VD83 1088 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 PGM5Q15124 567 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 CCDC62Q6P9F0 684 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 ANKRD33Q7Z3H0 272 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 CUL5Q93034 780 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 TOX2Q96NM4 488 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 LBHD1Q9BQE6 289 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-207ENST00000461195 PDLIM7Q9NR12 457 aa25.94■■□□□ 1.74
TRAF4-207ENST00000461195 MROH7Q68CQ1 1323 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 CNTNAP5Q8WYK1 1306 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 CLTBP09497 229 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 BRDTQ58F21 947 aaPredicted RBP25.93■■□□□ 1.74
TRAF4-207ENST00000461195 COPS5Q92905 334 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 LRCH3Q96II8 777 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 LTBP2Q14767 1821 aa25.93■■□□□ 1.74
TRAF4-207ENST00000461195 DCDC2CA8MYV0 355 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 ARVCFO00192 962 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 PIK3CDO00329 1044 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 CCND2P30279 289 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 METAP2P50579 478 aaKnown RBP eCLIP25.92■■□□□ 1.74
TRAF4-207ENST00000461195 CDK7P50613 346 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms