RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TERF1P54274 439 aa12.74□□□□□ -0.37
APTX-209ENST00000460940 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
APTX-209ENST00000460940 NSUN6Q8TEA1 469 aaKnown RBP12.74□□□□□ -0.37
APTX-209ENST00000460940 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
APTX-209ENST00000460940 GPKOWQ92917 476 aaPredicted RBP eCLIP12.74□□□□□ -0.379e-6■■□□□ 14.5
APTX-209ENST00000460940 PHKBQ93100 1093 aa12.74□□□□□ -0.37
APTX-209ENST00000460940 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
APTX-209ENST00000460940 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
APTX-209ENST00000460940 SLC26A6Q9BXS9 759 aa12.74□□□□□ -0.37
APTX-209ENST00000460940 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 STXBP3O00186 592 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 EDNRBP24530 442 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 CCND3P30281 292 aaPredicted RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 GJA8P48165 433 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 NAPAP54920 295 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 SSRP1Q08945 709 aaKnown RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 ME3Q16798 604 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 ZSCAN31Q96LW9 406 aaPredicted RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 PSTPIP2Q9H939 334 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
APTX-209ENST00000460940 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
APTX-209ENST00000460940 ESYT2A0FGR8 921 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 SEPT4O43236 478 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 DEXIO95424 95 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 U2AF1L4Q8WU68 220 aaKnown RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 FRMPD4Q14CM0 1322 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 ZNF865P0CJ78 1059 aaPredicted RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 AKR1A1P14550 325 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 MCM2P49736 904 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 ADCY7P51828 1080 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 PDE4DQ08499 809 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 ACVR2BQ13705 512 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 PKN1Q16512 942 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 KATNBL1Q9H079 304 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 SH3GLB2Q9NR46 395 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
APTX-209ENST00000460940 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
APTX-209ENST00000460940 MEIS2O14770 477 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 LARGE1O95461 756 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 SGPL1O95470 568 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 CNGA1P29973 690 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 SOX10P56693 466 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 PRAMEF19Q5SWL8 479 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.37
APTX-209ENST00000460940 CENPFP49454 3210 aa12.71□□□□□ -0.38
APTX-209ENST00000460940 MCTP2Q6DN12 878 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 WASF1Q92558 559 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 EHMT1Q9H9B1 1298 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 RARBP10826 455 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 EIF2AK2P19525 551 aaKnown RBP12.7□□□□□ -0.38
APTX-209ENST00000460940 GNA11P29992 359 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 AP3B2Q13367 1082 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 STXBP2Q15833 593 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 LHX8Q68G74 356 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 XRRA1Q6P2D8 792 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 USP17L6PQ6QN14 398 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 FCHSD1Q86WN1 690 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 FBXO16Q8IX29 292 aaPredicted RBP12.7□□□□□ -0.38
APTX-209ENST00000460940 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 BICD2Q8TD16 824 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 PDCD2LQ9BRP1 358 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
APTX-209ENST00000460940 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
APTX-209ENST00000460940 MCM3APO60318 1980 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 STAM2O75886 525 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 FOSP01100 380 aaPredicted RBP12.69□□□□□ -0.38
APTX-209ENST00000460940 NR3C2P08235 984 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 CCND2P30279 289 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 CCDC144BQ3MJ40 725 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 NSUN7Q8NE18 718 aaKnown RBP12.69□□□□□ -0.38
APTX-209ENST00000460940 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
APTX-209ENST00000460940 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms