RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 SCRN1Q12765 414 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 USP17L6PQ6QN14 398 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 FBXO16Q8IX29 292 aaPredicted RBP23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 ZNF713Q8N859 430 aaPredicted RBP23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 LENG1Q96BZ8 264 aaPredicted RBP23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 PSTPIP2Q9H939 334 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 PDGFCQ9NRA1 345 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 BARHL2Q9NY43 387 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 PPFIA3O75145 1194 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 FARP2O94887 1054 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 LARGE1O95461 756 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 RARBP10826 455 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 SCG2P13521 617 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 PDE4DQ08499 809 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 ME3Q16798 604 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 ARHGEF16Q5VV41 709 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 PPP1R18Q6NYC8 613 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 DIS3LQ8TF46 1054 aaKnown RBP23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 MPHOSPH6Q99547 160 aaKnown RBP23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 PDCD2LQ9BRP1 358 aa23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 RBM27Q9P2N5 1060 aaKnown RBP23.74■■□□□ 1.39
RPUSD3-210ENST00000460909 RBM47A0AV96 593 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 B4DLN1 442 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 EIF2AK2P19525 551 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 ADCYAP1R1P41586 468 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 MRPL12P52815 198 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 FCHSD1Q86WN1 690 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 SLKQ9H2G2 1235 aaPredicted RBP23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 UPF2Q9HAU5 1272 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 FRMPD4Q14CM0 1322 aa23.73■■□□□ 1.39
RPUSD3-210ENST00000460909 DUSP11O75319 330 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 NR3C2P08235 984 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 NAPAP54920 295 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 TMEM63BQ5T3F8 832 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 NOL8Q76FK4 1167 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 PAWRQ96IZ0 340 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 XPNPEP3Q9NQH7 507 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 KIAA1217Q5T5P2 1943 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 DNAH12Q6ZR08 3092 aa23.72■■□□□ 1.39
RPUSD3-210ENST00000460909 CPLX1O14810 134 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 ADAMTS4O75173 837 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 COL6A1P12109 1028 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 MLLT1Q03111 559 aaPredicted RBP23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 TNFAIP2Q03169 654 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 PGM5Q15124 567 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 STXBP2Q15833 593 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 IQSEC1Q6DN90 963 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 VSIG10LQ86VR7 867 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 ARRDC4Q8NCT1 418 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 IL31RAQ8NI17 732 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 SMARCC2Q8TAQ2 1214 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 CUL5Q93034 780 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 RIC8AQ9NPQ8 531 aa23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 GNEQ9Y223 722 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-210ENST00000460909 SYNRGQ9UMZ2 1314 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 DNM1LO00429 736 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 CTDNEP1O95476 244 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 PGK1P00558 417 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 SMPD1P17405 629 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 AKAP17AQ02040 695 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 SSRP1Q08945 709 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 LRRC41Q15345 812 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 UBE2SQ16763 222 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 GJC2Q5T442 439 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 TEX2Q8IWB9 1127 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 NECAB1Q8N987 351 aa23.7■■□□□ 1.38
RPUSD3-210ENST00000460909 SMCO2A6NFE2 343 aa23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 EIF3JO75822 258 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 PTGS1P23219 599 aa23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 NKX3-2P78367 333 aa23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 CPLX2Q6PUV4 134 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 NECAB2Q7Z6G3 386 aa23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 GTF3C6Q969F1 213 aa23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 UPF3AQ9H1J1 476 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-210ENST00000460909 ESYT2A0FGR8 921 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 CTAGE5O15320 804 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 RGS20O76081 388 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 GJA9P57773 515 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 IRX5P78411 483 aaPredicted RBP23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 RABEP1Q15276 862 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 DUSP28Q4G0W2 176 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 TRIM22Q8IYM9 498 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 KLHDC9Q8NEP7 349 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 WDR11Q9BZH6 1224 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 ZMYND12Q9H0C1 365 aa23.68■■□□□ 1.38
RPUSD3-210ENST00000460909 MYADML2A6NDP7 307 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 ADAMTS3O15072 1205 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 ARIH2O95376 493 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 DEXIO95424 95 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 MYCLP12524 364 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 CLK2P49760 499 aaKnown RBP23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 ADCY7P51828 1080 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 MRPS9P82933 396 aaKnown RBP23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 ST3GAL1Q11201 340 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 CCSAPQ6IQ19 270 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 CCDC62Q6P9F0 684 aa23.67■■□□□ 1.38
RPUSD3-210ENST00000460909 SCFD2Q8WU76 684 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms