RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 TTC14Q96N46 770 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 REV3LO60673 3130 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 XIRP2A4UGR9 3374 aa16.03■□□□□ 0.16
SCAMP4-206ENST00000460767 TRANK1O15050 2925 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 PTPRSQ13332 1948 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 TNKSO95271 1327 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 BAIAP3O94812 1187 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 STAT2P52630 851 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 TAP1Q03518 808 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 NECTIN1Q15223 517 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 NOL8Q76FK4 1167 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 FAM160B2Q86V87 743 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 POLR3EQ9NVU0 708 aa16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-206ENST00000460767 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 BMP3P12645 472 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 PSMC6P62333 389 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 ESR2Q92731 530 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 TMEM47Q9BQJ4 181 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SCAMP4-206ENST00000460767 B4E1Z4 1266 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 RFXAPO00287 272 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 LPXNO60711 386 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 KDM4AO75164 1064 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 SLC4A3P48751 1232 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 SLFN13Q68D06 897 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 DGKHQ86XP1 1220 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 HERC6Q8IVU3 1022 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 HOMER2Q9NSB8 354 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 TRMT13Q9NUP7 481 aaKnown RBP16■□□□□ 0.15
SCAMP4-206ENST00000460767 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 STX8Q9UNK0 236 aa16■□□□□ 0.15
SCAMP4-206ENST00000460767 RBM8AQ9Y5S9 174 aaKnown RBP16■□□□□ 0.15
SCAMP4-206ENST00000460767 RBM47A0AV96 593 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 PRR33A8MZF0 331 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 KIF28PB7ZC32 967 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 CDC45O75419 566 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 CPT1AP50416 773 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 GRB10Q13322 594 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 SEC23AQ15436 765 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 BTNL9Q6UXG8 535 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 FBXO16Q8IX29 292 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 CHURC1Q8WUH1 139 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 KRT23Q9C075 422 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 PDGFCQ9NRA1 345 aa15.99■□□□□ 0.15
SCAMP4-206ENST00000460767 E7EWF7 191 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 ARHGEF15O94989 841 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 IQCF3P0C7M6 154 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 PDHBP11177 359 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 CYP2C9P11712 490 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 COL9A3Q14050 684 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 KRT40Q6A162 431 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 NFRKBQ6P4R8 1299 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 CYB5R4Q7L1T6 521 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 ARNTL2Q8WYA1 636 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 TRERF1Q96PN7 1200 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 SIP14410 1827 aa15.98■□□□□ 0.15
SCAMP4-206ENST00000460767 TMEM232C9JQI7 657 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 PTGS1P23219 599 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 TSGA10IPQ3SY00 556 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 DEFB128Q7Z7B8 93 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 DCAF4Q8WV16 495 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 KCNB2Q92953 911 aa15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-206ENST00000460767 SLC27A2O14975 620 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■□□□□ 8.4
SCAMP4-206ENST00000460767 MCCP23508 829 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 ANTXR2P58335 489 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 KIAA1211Q6ZU35 1233 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 KCNH6Q9H252 994 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 CERS4Q9HA82 394 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 TOMM22Q9NS69 142 aa15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 ADD3Q9UEY8 706 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-206ENST00000460767 PIEZO1Q92508 2521 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 KPNA6O60684 536 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 PARNO95453 639 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 ALAS1P13196 640 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 SLC1A4P43007 532 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 RBL2Q08999 1139 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 ZNF543Q08ER8 600 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 BFSP2Q13515 415 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 MUM1L1Q5H9M0 696 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms