RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
NUCB1-208ENST00000460125 PLA2G6O60733 806 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 NBNO60934 754 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
NUCB1-208ENST00000460125 RBL2Q08999 1139 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 TCEAL5Q5H9L2 206 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 NSMFQ6X4W1 530 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
NUCB1-208ENST00000460125 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
NUCB1-208ENST00000460125 PRRX2Q99811 253 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 BOLA2Q9H3K6 86 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 ADD3Q9UEY8 706 aaKnown RBP12.95□□□□□ -0.34
NUCB1-208ENST00000460125 MUTYHQ9UIF7 546 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 INSL6Q9Y581 213 aa12.95□□□□□ -0.34
NUCB1-208ENST00000460125 RAD50Q92878 1312 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 GSG1L2A8MUP6 293 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 SNAP25P60880 206 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 TCF15Q12870 199 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 BAATQ14032 418 aaPredicted RBP12.94□□□□□ -0.34
NUCB1-208ENST00000460125 IKBKEQ14164 716 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
NUCB1-208ENST00000460125 GIMAP6Q6P9H5 292 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 SESTD1Q86VW0 696 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
NUCB1-208ENST00000460125 DHX38Q92620 1227 aaKnown RBP12.94□□□□□ -0.34
NUCB1-208ENST00000460125 EDAQ92838 391 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 COPS5Q92905 334 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 SAMD11Q96NU1 681 aa12.94□□□□□ -0.34
NUCB1-208ENST00000460125 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
NUCB1-208ENST00000460125 H3BNC9 293 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 CKBP12277 381 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 ATP5JP18859 108 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 LTBRP36941 435 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 SLC1A4P43007 532 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 SMAD2Q15796 467 aaKnown RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 PKN1Q16512 942 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.342e-9■■■□□ 18.3
NUCB1-208ENST00000460125 EP400NLQ6ZTU2 488 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 HAUS7Q99871 368 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 NSUN3Q9H649 340 aaKnown RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 PRR12Q9ULL5 1215 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
NUCB1-208ENST00000460125 MYH4Q9Y623 1939 aa12.93□□□□□ -0.34
NUCB1-208ENST00000460125 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
NUCB1-208ENST00000460125 LCTP09848 1927 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 GFRA3O60609 400 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 TECTAO75443 2155 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 PRDM1O75626 825 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 MCCP23508 829 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 GPM6BQ13491 265 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 SCFD2Q8WU76 684 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 PBXIP1Q96AQ6 731 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 CLDND1Q9NY35 253 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 TRIOO75962 3097 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
NUCB1-208ENST00000460125 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 M0R296 226 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 MBTPS2O43462 519 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 NCK2O43639 380 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 ICAM1P05362 532 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
NUCB1-208ENST00000460125 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 RPAINQ86UA6 219 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
NUCB1-208ENST00000460125 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
NUCB1-208ENST00000460125 RBAK-RBAKDNI3L0D1 243 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 NFIBO00712 420 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 LGR5O75473 907 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 TXNP10599 105 aaKnown RBP12.9□□□□□ -0.34
NUCB1-208ENST00000460125 EDNRBP24530 442 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 PDE4DQ08499 809 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 ITPRIPQ8IWB1 547 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 KAT2BQ92831 832 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
NUCB1-208ENST00000460125 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
NUCB1-208ENST00000460125 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms