RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NOL8Q76FK4 1167 aaKnown RBP18.07■□□□□ 0.48
SDF4-204ENST00000459994 JMJD4Q9H9V9 463 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 VAT1LQ9HCJ6 419 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 COL20A1Q9P218 1284 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 DOCK5Q9H7D0 1870 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
SDF4-204ENST00000459994 CDK7P50613 346 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 RCAN1P53805 252 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 QRICH1Q2TAL8 776 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 ANKRD33Q7Z3H0 272 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 NUP133Q8WUM0 1156 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
SDF4-204ENST00000459994 GRIN2DO15399 1336 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 SCN5AQ14524 2016 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 SCN10AQ9Y5Y9 1956 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 CCDC69A6NI79 296 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 KIAA0355O15063 1070 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
SDF4-204ENST00000459994 PARP1P09874 1014 aaKnown RBP18.05■□□□□ 0.48
SDF4-204ENST00000459994 APOBRQ0VD83 1088 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 NFXL1Q6ZNB6 911 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 PCSK9Q8NBP7 692 aaKnown RBP18.05■□□□□ 0.48
SDF4-204ENST00000459994 ZNF274Q96GC6 653 aaPredicted RBP18.05■□□□□ 0.48
SDF4-204ENST00000459994 ZSCAN31Q96LW9 406 aaPredicted RBP18.05■□□□□ 0.48
SDF4-204ENST00000459994 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 BRPF3Q9ULD4 1205 aa18.05■□□□□ 0.48
SDF4-204ENST00000459994 COL6A3P12111 3177 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 ELP1O95163 1332 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 OPLAHO14841 1288 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 CD2BP2O95400 341 aaKnown RBP18.04■□□□□ 0.48
SDF4-204ENST00000459994 EDNRBP24530 442 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 PSMC6P62333 389 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 FSCN1Q16658 493 aaKnown RBP18.04■□□□□ 0.48
SDF4-204ENST00000459994 APOA5Q6Q788 366 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 SYNE3Q6ZMZ3 975 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 CATIPQ7Z7H3 387 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 COPS5Q92905 334 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 VTI1AQ96AJ9 217 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 GLT1D1Q96MS3 346 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 TMEM39AQ9NV64 488 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 TPCN1Q9ULQ1 816 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 RBM19Q9Y4C8 960 aaKnown RBP18.04■□□□□ 0.48
SDF4-204ENST00000459994 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
SDF4-204ENST00000459994 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
SDF4-204ENST00000459994 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
SDF4-204ENST00000459994 ARVCFO00192 962 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 DDAH1O94760 285 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 CALM1P0DP23 149 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 CALM2P0DP24 149 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 CALM3P0DP25 149 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 TROAPQ12815 778 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 IQSEC1Q6DN90 963 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 FAM126BQ8IXS8 530 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 TOX2Q96NM4 488 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 MAP3K14Q99558 947 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 SPC25Q9HBM1 224 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
SDF4-204ENST00000459994 TBX21Q9UL17 535 aa18.03■□□□□ 0.48
SDF4-204ENST00000459994 PALM3A6NDB9 673 aaPredicted RBP18.02■□□□□ 0.48
SDF4-204ENST00000459994 ZBTB43O43298 467 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 DHX16O60231 1041 aaKnown RBP18.02■□□□□ 0.48
SDF4-204ENST00000459994 ARIH2O95376 493 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
SDF4-204ENST00000459994 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 DUSP28Q4G0W2 176 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 DEFB123Q8N688 67 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 SYTL5Q8TDW5 730 aaPredicted RBP18.02■□□□□ 0.48
SDF4-204ENST00000459994 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
SDF4-204ENST00000459994 SH2B1Q9NRF2 756 aaPredicted RBP18.02■□□□□ 0.48
SDF4-204ENST00000459994 ABCB11O95342 1321 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 TRIP12Q14669 1992 aaPredicted RBP18.01■□□□□ 0.47
SDF4-204ENST00000459994 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 KLRF2D3W0D1 207 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 CYTH3O43739 400 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 PFKFB2O60825 505 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 RAG1P15918 1043 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 GRM4Q14833 912 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 FBXO11Q86XK2 927 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 SLC43A3Q8NBI5 491 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 MTMR8Q96EF0 704 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 LARP6Q9BRS8 491 aaKnown RBP18.01■□□□□ 0.47
SDF4-204ENST00000459994 AP5M1Q9H0R1 490 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 NID2Q14112 1375 aa18.01■□□□□ 0.47
SDF4-204ENST00000459994 UMODL1Q5DID0 1318 aa18■□□□□ 0.47
SDF4-204ENST00000459994 GOLGA8BA8MQT2 603 aa18■□□□□ 0.47
SDF4-204ENST00000459994 CD4P01730 458 aa18■□□□□ 0.47
SDF4-204ENST00000459994 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
SDF4-204ENST00000459994 PDE4DQ08499 809 aa18■□□□□ 0.47
SDF4-204ENST00000459994 ME3Q16798 604 aa18■□□□□ 0.47
SDF4-204ENST00000459994 HSCBQ8IWL3 235 aa18■□□□□ 0.47
SDF4-204ENST00000459994 RGS22Q8NE09 1264 aa18■□□□□ 0.47
SDF4-204ENST00000459994 DNERQ8NFT8 737 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms