RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 GDAQ9Y2T3 454 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 LEMD3Q9Y2U8 911 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PCDHA8Q9Y5H6 950 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 FLT1P17948 1338 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 STXBP3O00186 592 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 BAG3O95817 575 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 OR52Z1P0C646 297 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TCP1P17987 556 aaKnown RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TNFRSF8P28908 595 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 CASP1P29466 404 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 MMP14P50281 582 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 VAV2P52735 878 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TFAP4Q01664 338 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TBC1D8BQ0IIM8 1120 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 KIF5AQ12840 1032 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 NONOQ15233 471 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 ERFEQ4G0M1 354 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 GLE1Q53GS7 698 aaKnown RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 NOM1Q5C9Z4 860 aaKnown RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 CCDC122Q5T0U0 273 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 KIAA1328Q86T90 577 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 CABP7Q86V35 215 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 SP8Q8IXZ3 490 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 RNF10Q8N5U6 811 aaKnown RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 CSGALNACT2Q8N6G5 542 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 COG1Q8WTW3 980 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 SYN2Q92777 582 aaPredicted RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 JAKMIP2Q96AA8 810 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM163AQ96GL9 167 aaPredicted RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 PSMD1Q99460 953 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TRIM9Q9C026 710 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 EPC1Q9H2F5 836 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 PDE11AQ9HCR9 933 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 C6orf50Q9HD87 102 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 ZCCHC17Q9NP64 241 aaKnown RBP6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 TSKSQ9UJT2 592 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 JRKLQ9Y4A0 524 aa6.83□□□□□ -1.32
UBQLN4-202ENST00000459954 ATP8B3O60423 1300 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM205AQ6ZU69 1335 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 LRRC37AA6NMS7 1700 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 CYP2D7A0A087X1C5 515 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 SSU72P8A0A1W2PR75 194 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 hCG_1642624A0A1W2PR95 340 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 ERICH4A6NGS2 130 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 TACC1O75410 805 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 PLCG2P16885 1265 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 TRIM21P19474 475 aaKnown RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 FXR2P51116 673 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 IRX5P78411 483 aaPredicted RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 LRRC63Q05C16 580 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 NNTQ13423 1086 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 GRAPQ13588 217 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 MCM6Q14566 821 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 MAN2A1Q16706 1144 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 MIIPQ5JXC2 388 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 CCNI2Q6ZMN8 369 aaPredicted RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 GBP6Q6ZN66 633 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 UNC13DQ70J99 1090 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 NEK8Q86SG6 692 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 ZNF444Q8N0Y2 327 aaPredicted RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 GUF1Q8N442 669 aaKnown RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 C1orf131Q8NDD1 294 aaKnown RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 GRAPLQ8TC17 118 aaPredicted RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 STAMQ92783 540 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 ZNF622Q969S3 477 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 CALML4Q96GE6 196 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 NAP1L4Q99733 375 aaKnown RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 RAB34Q9BZG1 259 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM107BQ9H098 131 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 TMEM60Q9H2L4 133 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 NHEJ1Q9H9Q4 299 aaPredicted RBP6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 IL17RBQ9NRM6 502 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 MCM9Q9NXL9 1143 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 GUCA1BQ9UMX6 200 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 ATP6V0A2Q9Y487 856 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 MYH11P35749 1972 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 PLIN4Q96Q06 1357 aa6.82□□□□□ -1.32
UBQLN4-202ENST00000459954 A0A0U1RQJ8 604 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RASSF10A6NK89 507 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 LRRIQ3A6PVS8 624 aaPredicted RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 KLRF2D3W0D1 207 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 CYTH3O43739 400 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 NMT2O60551 498 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SHOX2O60902 331 aaPredicted RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PPFIA4O75335 1185 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PRPF6O94906 941 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 ABL1P00519 1130 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 LDHBP07195 334 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RHOXF2BP0C7M4 288 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 TSPY3P0CV98 308 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 TSPY8P0CW00 308 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PLCG1P19174 1290 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 LMNB1P20700 586 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms