RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 A0A087X0B3 334 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 SPDYE16A6NNV3 312 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-204ENST00000459639 FKBP1BP68106 108 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 TMEM266Q2M3C6 531 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 PDILTQ8N807 584 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 OPTNQ96CV9 577 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 CCDC34Q96HJ3 373 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 CCSER1Q9C0I3 900 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 SERTAD1Q9UHV2 236 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 NFIBO00712 420 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 HOXA7P31268 230 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-204ENST00000459639 Q4G0T1 1027 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 TREML2Q5T2D2 321 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 GADL1Q6ZQY3 521 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 IGSF22Q8N9C0 903 aa27.62■■■□□ 2.01
U2AF1-204ENST00000459639 ZNF214Q9UL59 606 aaPredicted RBP27.62■■■□□ 2.01
U2AF1-204ENST00000459639 DHX58Q96C10 678 aa27.61■■■□□ 2.01
U2AF1-204ENST00000459639 PANK2Q9BZ23 570 aa27.61■■■□□ 2.01
U2AF1-204ENST00000459639 RAB34Q9BZG1 259 aa27.61■■■□□ 2.01
U2AF1-204ENST00000459639 ZNF408Q9H9D4 720 aa27.61■■■□□ 2.01
U2AF1-204ENST00000459639 TXKP42681 527 aa27.6■■■□□ 2.01
U2AF1-204ENST00000459639 MUM1L1Q5H9M0 696 aa27.6■■■□□ 2.01
U2AF1-204ENST00000459639 IQUBQ8NA54 791 aa27.6■■■□□ 2.01
U2AF1-204ENST00000459639 TRERF1Q96PN7 1200 aa27.6■■■□□ 2.01
U2AF1-204ENST00000459639 RABGAP1Q9Y3P9 1069 aa27.6■■■□□ 2.01
U2AF1-204ENST00000459639 SLFN14P0C7P3 912 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 UBA7P41226 1012 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 TECP42680 631 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 E2F4Q16254 413 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 STX1AQ16623 288 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 TKFCQ3LXA3 575 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 SNRNP48Q6IEG0 339 aaKnown RBP27.59■■■□□ 2.01
U2AF1-204ENST00000459639 HAS1Q92839 578 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 KCNMB3Q9NPA1 279 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 HOMER2Q9NSB8 354 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 TBX3O15119 743 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 XRCC6P12956 609 aaKnown RBP eCLIP27.59■■■□□ 2.01
U2AF1-204ENST00000459639 TMEM132BQ14DG7 1078 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 CEP57L1Q8IYX8 460 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 TEX13BQ9BXU2 312 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 NMRK2Q9NPI5 230 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 RNF146Q9NTX7 359 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 AGTPBP1Q9UPW5 1226 aa27.59■■■□□ 2.01
U2AF1-204ENST00000459639 MDM2Q00987 491 aaPredicted RBP27.58■■■□□ 2.01
U2AF1-204ENST00000459639 FMR1Q06787 632 aaKnown RBP eCLIP27.58■■■□□ 2.01
U2AF1-204ENST00000459639 PDIA5Q14554 519 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 POSTNQ15063 836 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 FASTKD5Q7L8L6 764 aaKnown RBP27.58■■■□□ 2.01
U2AF1-204ENST00000459639 SLC10A4Q96EP9 437 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 CCDC39Q9UFE4 941 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 TUBE1Q9UJT0 475 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 RPTORQ8N122 1335 aa27.58■■■□□ 2.01
U2AF1-204ENST00000459639 TRPM7Q96QT4 1865 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 PP2D1A8MPX8 630 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 CAVIN2O95810 425 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 SLFN12Q8IYM2 578 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 MB21D1Q8N884 522 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 ERCC4Q92889 916 aaPredicted RBP27.57■■■□□ 2
U2AF1-204ENST00000459639 LENG9Q96B70 501 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 MAF1Q9H063 256 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 TTC12Q9H892 705 aaPredicted RBP27.57■■■□□ 2
U2AF1-204ENST00000459639 GBA2Q9HCG7 927 aaPredicted RBP27.57■■■□□ 2
U2AF1-204ENST00000459639 DISC1Q9NRI5 854 aa27.57■■■□□ 2
U2AF1-204ENST00000459639 FAM86B1E9PN63 330 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 MARCH6O60337 910 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 FAM86B2P0C5J1 330 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 CDC25AP30304 524 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 PNOCQ13519 176 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 SH3RF1Q7Z6J0 888 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 CABP7Q86V35 215 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 RNF214Q8ND24 703 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 ANO10Q9NW15 660 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 RIPK3Q9Y572 518 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 FRMPD4Q14CM0 1322 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.56■■■□□ 2
U2AF1-204ENST00000459639 ZNF76P36508 570 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 KARSQ15046 597 aaKnown RBP27.56■■■□□ 2
U2AF1-204ENST00000459639 ANO6Q4KMQ2 910 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 PRR16Q569H4 304 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 LBX2Q6XYB7 198 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 ETNPPLQ8TBG4 499 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 SYTL5Q8TDW5 730 aaPredicted RBP27.56■■■□□ 2
U2AF1-204ENST00000459639 COL20A1Q9P218 1284 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 LRWD1Q9UFC0 647 aa27.56■■■□□ 2
U2AF1-204ENST00000459639 GJA5P36382 358 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 IRX3P78415 501 aaPredicted RBP27.55■■■□□ 2
U2AF1-204ENST00000459639 PABPC4Q13310 644 aaKnown RBP eCLIP27.55■■■□□ 2
U2AF1-204ENST00000459639 SNAPC2Q13487 334 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 MOGSQ13724 837 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 ZRSR1Q15695 479 aaKnown RBP27.55■■■□□ 2
U2AF1-204ENST00000459639 PDXDC2PQ6P474 469 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 RNF207Q6ZRF8 634 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 FAM200AQ8TCP9 573 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 PCDHA12Q9UN75 941 aa27.55■■■□□ 2
U2AF1-204ENST00000459639 FOXN1O15353 648 aa27.54■■■□□ 2
U2AF1-204ENST00000459639 STAT3P40763 770 aa27.54■■■□□ 2
U2AF1-204ENST00000459639 STAT6P42226 847 aa27.54■■■□□ 2
U2AF1-204ENST00000459639 RPS6P62753 249 aaKnown RBP27.54■■■□□ 2
U2AF1-204ENST00000459639 C2orf69Q8N8R5 385 aa27.54■■■□□ 2
U2AF1-204ENST00000459639 RASSF8Q8NHQ8 419 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms