RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 CDKL2Q92772 493 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 DESI2Q9BSY9 194 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 LRRN2O75325 713 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 YWHAHQ04917 246 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-217ENST00000459625 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 ACCSLQ4AC99 568 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 CCDC38Q502W7 563 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
HDAC7-217ENST00000459625 SIX6OS1Q8N1H7 587 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 HEXIM2Q96MH2 286 aaKnown RBP17.46■□□□□ 0.39
HDAC7-217ENST00000459625 ANLNQ9NQW6 1124 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 PPWD1Q96BP3 646 aaKnown RBP17.46■□□□□ 0.39
HDAC7-217ENST00000459625 IQGAP2Q13576 1575 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 CEP170P1Q96L14 293 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 TTC1Q99614 292 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 KRT10P13645 584 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 PMLP29590 882 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 RASGRP4Q8TDF6 673 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
HDAC7-217ENST00000459625 KBTBD3Q8NAB2 608 aa17.46■□□□□ 0.38
HDAC7-217ENST00000459625 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.38
HDAC7-217ENST00000459625 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.38
HDAC7-217ENST00000459625 SEPT8Q92599 483 aa17.46■□□□□ 0.38
HDAC7-217ENST00000459625 INHBAP08476 426 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 USH1CQ9Y6N9 552 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 SCN4BQ8IWT1 228 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
HDAC7-217ENST00000459625 FAM95CA0A1B0GW59 222 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 ERFEQ4G0M1 354 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 ELMSAN1Q6PJG2 1045 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 TMTC1Q8IUR5 882 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 IFNL3Q8IZI9 196 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-217ENST00000459625 STX1BP61266 288 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 KCTD6Q8NC69 237 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 CALN1Q9BXU9 219 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 ARHGAP6O43182 974 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 APOEP02649 317 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 LRRC41Q15345 812 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
HDAC7-217ENST00000459625 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 CPP00450 1065 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 TUBB4BP68371 445 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 PTK2Q05397 1052 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 HSPH1Q92598 858 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 BCAP29Q9UHQ4 241 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 IRX4P78413 519 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 DARS2Q6PI48 645 aaKnown RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 FAM196AQ6ZSG2 479 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 CLIC6Q96NY7 704 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 COG4Q9H9E3 785 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 GADD45BO75293 160 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 TRIP13Q15645 432 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-217ENST00000459625 GBP5Q96PP8 586 aa17.44■□□□□ 0.38
HDAC7-217ENST00000459625 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 SPOPLQ6IQ16 392 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 TRMT10CQ7L0Y3 403 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 EVI5O60447 810 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 KCNA1Q09470 495 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 HADHAP40939 763 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 ARHGEF18Q6ZSZ5 1173 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 SNX19Q92543 992 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 SARS2Q9NP81 518 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 ORC6Q9Y5N6 252 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 TUBB4AP04350 444 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 RASSF2P50749 326 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 BASP1P80723 227 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 SMAD1Q15797 465 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 TMEM259Q4ZIN3 620 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 MAP7D3Q8IWC1 876 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 MIS12Q9H081 205 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 RIPOR2Q9Y4F9 1068 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 N4BP1O75113 896 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 MYL1P05976 194 aa17.43■□□□□ 0.38
HDAC7-217ENST00000459625 VCPP55072 806 aaKnown RBP17.43■□□□□ 0.38
HDAC7-217ENST00000459625 ATP8B3O60423 1300 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 DDIT3P35638 169 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 PTPN21Q16825 1174 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 ADD3Q9UEY8 706 aaKnown RBP17.42■□□□□ 0.38
HDAC7-217ENST00000459625 COL4A3BPQ9Y5P4 624 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
HDAC7-217ENST00000459625 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms