RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 ADCY3O60266 1144 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 DIAPH1O60610 1272 aaKnown RBP4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 C8AP07357 584 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 FAM153BP0C7A2 387 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 GLI4P10075 376 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 GLDCP23378 1020 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 VIPR1P32241 457 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 PKN1Q16512 942 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 ZC3H12BQ5HYM0 836 aaKnown RBP4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 ZC3H14Q6PJT7 736 aaKnown RBP4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 RSPO2Q6UXX9 243 aaPredicted RBP4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 USP53Q70EK8 1073 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 SCUBE1Q8IWY4 988 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 NETO2Q8NC67 525 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 PLEKHO2Q8TD55 490 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 DCAF4Q8WV16 495 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 DNAJC7Q99615 494 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 LNPKQ9C0E8 428 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 GPR27Q9NS67 375 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 MARCH2Q9P0N8 246 aa4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 CDK11AQ9UQ88 783 aaPredicted RBP4.6□□□□□ -1.67
SCARNA18-201ENST00000459004 ZC3H12DA2A288 527 aaKnown RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 F8W031 263 aaPredicted RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 ETV2O00321 342 aaPredicted RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 MED14OSP0DP75 135 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 LCP1P13796 627 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 BCL6P41182 706 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 LSAMPQ13449 338 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 YOD1Q5VVQ6 348 aaPredicted RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 CEP68Q76N32 757 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 DPH6Q7L8W6 267 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 MRFAP1L1Q96HT8 127 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 CHAMP1Q96JM3 812 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 CDC6Q99741 560 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 BTG4Q9NY30 223 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 MBD1Q9UIS9 605 aaPredicted RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 DBR1Q9UK59 544 aaKnown RBP4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 NUDT5Q9UKK9 219 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 X6R8D5 127 aa4.59□□□□□ -1.67
SCARNA18-201ENST00000459004 TRBV23-1A0A0A0MS06 115 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 C22orf46C9J442 243 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 H7BY64 318 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 ZBTB7AO95365 584 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 TSPAN15O95858 294 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 KRT1P04264 644 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 NTRK1P04629 796 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 C1QTNF9P0C862 333 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 RAP1GAPP47736 663 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 DLG4P78352 724 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 BMS1Q14692 1282 aaKnown RBP4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 NTRK3Q16288 839 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 CCDC144BQ3MJ40 725 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 PLEKHN1Q494U1 663 aaPredicted RBP4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 MROH9Q5TGP6 573 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 WWC2Q6AWC2 1192 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 TMC6Q7Z403 805 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 LDHDQ86WU2 507 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 RIOX2Q8IUF8 465 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 TEX2Q8IWB9 1127 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 Q8N1Y9 231 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 JMYQ8N9B5 988 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 THAP3Q8WTV1 239 aaPredicted RBP4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 TRMT2BQ96GJ1 504 aaKnown RBP4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 PEX11GQ96HA9 241 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 TMEM169Q96HH4 297 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 ZFYVE21Q9BQ24 234 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 DHRS4Q9BTZ2 278 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 ZSWIM4Q9H7M6 989 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 CNTD2Q9H8S5 307 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 GOLGA2P5Q9HBQ8 144 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 FBLN5Q9UBX5 448 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 PCDHA2Q9Y5H9 948 aa4.58□□□□□ -1.68
SCARNA18-201ENST00000459004 CCDC163A0A0D9SF12 145 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 TCAF2A6NFQ2 919 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 N4BP3O15049 544 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 PRR5P85299 388 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 SLC9A5Q14940 896 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 ZNF124Q15973 351 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 FAM209AQ5JX71 171 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 FOXB2Q5VYV0 432 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 STYK1Q6J9G0 422 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 ATG14Q6ZNE5 492 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 NLRP10Q86W26 655 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 ANKLE2Q86XL3 938 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 DCP2Q8IU60 420 aaKnown RBP4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 TSPAN17Q96FV3 270 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 PHF20Q9BVI0 1012 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 SGPP1Q9BX95 441 aa4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 SMG5Q9UPR3 1016 aaKnown RBP4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
SCARNA18-201ENST00000459004 IRS2Q9Y4H2 1338 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 MSCO60682 206 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 YBX3P16989 372 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 FPR2P25090 351 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 CDR1P51861 262 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 GPR85P60893 370 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 KCNT2Q6UVM3 1135 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 LBX2Q6XYB7 198 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms