RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 NT5C2P49902 561 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
HDLBP-227ENST00000458564 PDE1AP54750 535 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 TMEM67Q5HYA8 995 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
HDLBP-227ENST00000458564 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
HDLBP-227ENST00000458564 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 GPCPD1Q9NPB8 672 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 TOMM22Q9NS69 142 aa12.26□□□□□ -0.45
HDLBP-227ENST00000458564 PRRC2BQ5JSZ5 2229 aaKnown RBP12.25□□□□□ -0.45
HDLBP-227ENST00000458564 BAIAP3O94812 1187 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 IQCF3P0C7M6 154 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 BFSP2Q13515 415 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 DEFB128Q7Z7B8 93 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 ZNF589Q86UQ0 364 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-227ENST00000458564 SESTD1Q86VW0 696 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-227ENST00000458564 MTCH2Q9Y6C9 303 aa12.25□□□□□ -0.45
HDLBP-227ENST00000458564 ARIH2O95376 493 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 TXNP10599 105 aaKnown RBP12.24□□□□□ -0.45
HDLBP-227ENST00000458564 BMP1P13497 986 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 RBL2Q08999 1139 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 HDAC1Q13547 482 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-227ENST00000458564 SCN5AQ14524 2016 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 ANKRD45Q5TZF3 282 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 TBC1D10CQ8IV04 446 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 HERC6Q8IVU3 1022 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 RETREG2Q8NC44 543 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 CAGE1Q8TC20 777 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 COPS5Q92905 334 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
HDLBP-227ENST00000458564 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-227ENST00000458564 EPOPA6NHQ4 379 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-227ENST00000458564 HAND2P61296 217 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 TAP1Q03518 808 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 NMIQ13287 307 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-227ENST00000458564 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 ESR2Q92731 530 aa12.23□□□□□ -0.45
HDLBP-227ENST00000458564 ABCB11O95342 1321 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 NEDD4P46934 1319 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 KIF28PB7ZC32 967 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 ARHGEF15O94989 841 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 PARNO95453 639 aaKnown RBP12.22□□□□□ -0.45
HDLBP-227ENST00000458564 MMP3P08254 477 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 TFF2Q03403 129 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 USH1GQ495M9 461 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
HDLBP-227ENST00000458564 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 EMID1Q96A84 441 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-227ENST00000458564 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 COG5Q9UP83 839 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 TET1Q8NFU7 2136 aa12.22□□□□□ -0.45
HDLBP-227ENST00000458564 RFXAPO00287 272 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 GH1P01241 217 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 MFAP1P55081 439 aaKnown RBP12.21□□□□□ -0.45
HDLBP-227ENST00000458564 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
HDLBP-227ENST00000458564 GPNMBQ14956 572 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-227ENST00000458564 PTGISQ16647 500 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 ASPRV1Q53RT3 343 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 IQCA1Q86XH1 822 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-227ENST00000458564 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 KAT2BQ92831 832 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 NECAB3Q96P71 396 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-227ENST00000458564 FTOQ9C0B1 505 aaKnown RBP eCLIP12.21□□□□□ -0.453e-8■■■■□ 24.2
HDLBP-227ENST00000458564 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
HDLBP-227ENST00000458564 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
HDLBP-227ENST00000458564 TLL1O43897 1013 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 LPXNO60711 386 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 CXCL10P02778 98 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 SELPP16109 830 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
HDLBP-227ENST00000458564 KCNJ6P48051 423 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 KCNQ1P51787 676 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
HDLBP-227ENST00000458564 GHRHRQ02643 423 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
HDLBP-227ENST00000458564 STXBP2Q15833 593 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 LY6KQ17RY6 165 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 GDF6Q6KF10 455 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-227ENST00000458564 LRRC8DQ7L1W4 858 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 MCF2L2Q86YR7 1114 aa12.2□□□□□ -0.46
HDLBP-227ENST00000458564 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms