RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 GNGT1P63211 74 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 INF2Q27J81 1249 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
LSS-205ENST00000457828 KRT25Q7Z3Z0 450 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 DAGLAQ9Y4D2 1042 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 INPP5BP32019 993 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 STXBP4Q6ZWJ1 553 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 RRAGAQ7L523 313 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 TCHPQ9BT92 498 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 ZNF341Q9BYN7 854 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 GMPSP49915 693 aaPredicted RBP18.05■□□□□ 0.48
LSS-205ENST00000457828 GSPT2Q8IYD1 628 aaKnown RBP18.05■□□□□ 0.48
LSS-205ENST00000457828 C2orf69Q8N8R5 385 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 HDAC6Q9UBN7 1215 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
LSS-205ENST00000457828 BMP3P12645 472 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.05■□□□□ 0.48
LSS-205ENST00000457828 DNM2P50570 870 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 NUP58Q9BVL2 599 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 PRM3Q9NNZ6 103 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 FBXO2Q9UK22 296 aaPredicted RBP18.05■□□□□ 0.48
LSS-205ENST00000457828 ZHX2Q9Y6X8 837 aa18.05■□□□□ 0.48
LSS-205ENST00000457828 TRAF5O00463 557 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 DDAH1O94760 285 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 SCG2P13521 617 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 CXCR5P32302 372 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 RAPGEF1Q13905 1077 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 ABHD10Q9NUJ1 306 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 USP14P54578 494 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 CUL4BQ13620 913 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 RASA3Q14644 834 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 KCTD16Q68DU8 428 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 TXNRD3Q86VQ6 643 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 TUBGCP2Q9BSJ2 902 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 TRIM49BA6NDI0 452 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 FXR1P51114 621 aaKnown RBP eCLIP18.04■□□□□ 0.48
LSS-205ENST00000457828 C2orf54Q08AI8 447 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
LSS-205ENST00000457828 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
LSS-205ENST00000457828 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
LSS-205ENST00000457828 SAMD7Q7Z3H4 446 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 NAP1L4Q99733 375 aaKnown RBP18.03■□□□□ 0.48
LSS-205ENST00000457828 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 MYO1AQ9UBC5 1043 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 FAM170AA1A519 330 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 BUB1O43683 1085 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 GUCY2FP51841 1108 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 SEPT2Q15019 361 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 BRDTQ58F21 947 aaPredicted RBP18.03■□□□□ 0.48
LSS-205ENST00000457828 PRAMEF18Q5VWM3 479 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 TRIM65Q6PJ69 517 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 RPGRIP1Q96KN7 1286 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 PPFIA1Q13136 1202 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 PTPAQ15257 358 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 PTPROQ16827 1216 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 TMEM179Q6ZVK1 233 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 CABP7Q86V35 215 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
LSS-205ENST00000457828 BLIDQ8IZY5 108 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 SUGT1Q9Y2Z0 365 aa18.03■□□□□ 0.48
LSS-205ENST00000457828 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
LSS-205ENST00000457828 TESPA1A2RU30 521 aaPredicted RBP18.02■□□□□ 0.48
LSS-205ENST00000457828 GSG1L2A8MUP6 293 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 LMNB1P20700 586 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 SV2BQ7L1I2 683 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 KLHL7Q8IXQ5 586 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 CHD2O14647 1828 aaKnown RBP18.02■□□□□ 0.48
LSS-205ENST00000457828 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 N4BP1O75113 896 aaKnown RBP18.02■□□□□ 0.48
LSS-205ENST00000457828 SF3A3Q12874 501 aaKnown RBP eCLIP18.02■□□□□ 0.484e-7■■■■□ 19.4
LSS-205ENST00000457828 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
LSS-205ENST00000457828 SPP2Q13103 211 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 ASPRV1Q53RT3 343 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 TCP11X2Q5H9J9 407 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 CEP57Q86XR8 500 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 DYDC1Q8WWB3 177 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 CAPS2Q9BXY5 557 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 DISP2A7MBM2 1401 aa18.02■□□□□ 0.47
LSS-205ENST00000457828 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 CNNM4Q6P4Q7 775 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 SGMS1Q86VZ5 419 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 TRIM58Q8NG06 486 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 NOX5Q96PH1 765 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 SLC39A2Q9NP94 309 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 A0A1B0GTH6 734 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 NR1I3Q14994 352 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 TMED8Q6PL24 325 aaPredicted RBP18.01■□□□□ 0.47
LSS-205ENST00000457828 CHP1Q99653 195 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 FUT8Q9BYC5 575 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 TBC1D7Q9P0N9 293 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 NOD1Q9Y239 953 aa18.01■□□□□ 0.47
LSS-205ENST00000457828 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms