RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 VTI1AQ96AJ9 217 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 GLT1D1Q96MS3 346 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 CYP46A1Q9Y6A2 500 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 GOLGA8AA7E2F4 631 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 GOLGA8BA8MQT2 603 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 DYNC1LI2O43237 492 aaPredicted RBP26.75■■□□□ 1.87
CBX3-204ENST00000456948 ACLYP53396 1101 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 SLC35G1Q2M3R5 365 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 DUSP28Q4G0W2 176 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 RAB11FIP4Q86YS3 637 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 FBXL16Q8N461 479 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 CCDC82Q8N4S0 544 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 PDGFCQ9NRA1 345 aa26.75■■□□□ 1.87
CBX3-204ENST00000456948 RBM47A0AV96 593 aaKnown RBP26.74■■□□□ 1.87
CBX3-204ENST00000456948 SMPD1P17405 629 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 TTLL4Q14679 1199 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 C1orf53Q5VUE5 145 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 STARD7Q9NQZ5 370 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 PXMP2Q9NR77 195 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 BRPF3Q9ULD4 1205 aa26.74■■□□□ 1.87
CBX3-204ENST00000456948 GNEQ9Y223 722 aaKnown RBP26.74■■□□□ 1.87
CBX3-204ENST00000456948 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 A0A1W2PQ45 241 aaPredicted RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 A0A1W2PQY0 241 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 EIF3JO75822 258 aaKnown RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 METAP2P50579 478 aaKnown RBP eCLIP26.73■■□□□ 1.87
CBX3-204ENST00000456948 NKX3-2P78367 333 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 FSCN1Q16658 493 aaKnown RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 RUFY3Q7L099 469 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 CMTR1Q8N1G2 835 aaKnown RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 BRF1Q92994 677 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 TM6SF1Q9BZW5 370 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 COL20A1Q9P218 1284 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 RBM27Q9P2N5 1060 aaKnown RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 ZMYND8Q9ULU4 1186 aaPredicted RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 DDX49Q9Y6V7 483 aaKnown RBP26.73■■□□□ 1.87
CBX3-204ENST00000456948 LCTP09848 1927 aa26.73■■□□□ 1.87
CBX3-204ENST00000456948 ELP1O95163 1332 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 CABYRO75952 493 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 NR3C2P08235 984 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 EIF2AK2P19525 551 aaKnown RBP26.72■■□□□ 1.87
CBX3-204ENST00000456948 HOXA13P31271 388 aaPredicted RBP26.72■■□□□ 1.87
CBX3-204ENST00000456948 RTP1P59025 263 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 SMARCC2Q8TAQ2 1214 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 ZSWIM6Q9HCJ5 1215 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 ATP11BQ9Y2G3 1177 aa26.72■■□□□ 1.87
CBX3-204ENST00000456948 OPLAHO14841 1288 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 ADCY6O43306 1168 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 ASGR1P07306 291 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 TXNP10599 105 aaKnown RBP26.71■■□□□ 1.87
CBX3-204ENST00000456948 CPA1P15085 419 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 CPT1AP50416 773 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 FCHSD1Q86WN1 690 aa26.71■■□□□ 1.87
CBX3-204ENST00000456948 SYN1P17600 705 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 APOBRQ0VD83 1088 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 SNX17Q15036 470 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 CCSAPQ6IQ19 270 aaPredicted RBP26.7■■□□□ 1.86
CBX3-204ENST00000456948 KCNV1Q6PIU1 500 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 SEPT14Q6ZU15 432 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 SEZ6LQ9BYH1 1024 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 PSTPIP2Q9H939 334 aa26.7■■□□□ 1.86
CBX3-204ENST00000456948 MROH7Q68CQ1 1323 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 MYCLP12524 364 aaPredicted RBP26.69■■□□□ 1.86
CBX3-204ENST00000456948 CCND2P30279 289 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 HEATR3Q7Z4Q2 680 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 TEX2Q8IWB9 1127 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 OR6J1Q8NGC5 347 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 LBHD1Q9BQE6 289 aaPredicted RBP26.69■■□□□ 1.86
CBX3-204ENST00000456948 PDCD2LQ9BRP1 358 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 AGXT2Q9BYV1 514 aa26.69■■□□□ 1.86
CBX3-204ENST00000456948 MYADML2A6NDP7 307 aa26.68■■□□□ 1.86
CBX3-204ENST00000456948 hCG_1984214I3L0E3 225 aa26.68■■□□□ 1.86
CBX3-204ENST00000456948 ANAPC15P60006 121 aa26.68■■□□□ 1.86
CBX3-204ENST00000456948 AKAP17AQ02040 695 aaKnown RBP26.68■■□□□ 1.86
CBX3-204ENST00000456948 ZNF713Q8N859 430 aaPredicted RBP26.68■■□□□ 1.86
CBX3-204ENST00000456948 POLR3EQ9NVU0 708 aa26.68■■□□□ 1.86
CBX3-204ENST00000456948 V9GY48 417 aaPredicted RBP26.68■■□□□ 1.86
CBX3-204ENST00000456948 DCDC2CA8MYV0 355 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 PIK3CDO00329 1044 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 KPNA6O60684 536 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 STAM2O75886 525 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 BEX3Q00994 111 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 TRIM60Q495X7 471 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 GLT8D2Q9H1C3 349 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 MRVI1Q9Y6F6 885 aa26.67■■□□□ 1.86
CBX3-204ENST00000456948 A0A0U1RQG5 324 aaPredicted RBP26.66■■□□□ 1.86
CBX3-204ENST00000456948 FXR1P51114 621 aaKnown RBP eCLIP26.66■■□□□ 1.86
CBX3-204ENST00000456948 PGM5Q15124 567 aa26.66■■□□□ 1.86
CBX3-204ENST00000456948 GNPTABQ3T906 1256 aa26.66■■□□□ 1.86
CBX3-204ENST00000456948 VSIG10LQ86VR7 867 aa26.66■■□□□ 1.86
CBX3-204ENST00000456948 EHMT1Q9H9B1 1298 aa26.66■■□□□ 1.86
CBX3-204ENST00000456948 LRRC37A2A6NM11 1700 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 hCG_1642624A0A1W2PR95 340 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 TLE2Q04725 743 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 PPP1R18Q6NYC8 613 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 XRRA1Q6P2D8 792 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 TOX2Q96NM4 488 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 PDRG1Q9NUG6 133 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 CNTNAP5Q8WYK1 1306 aa26.65■■□□□ 1.86
CBX3-204ENST00000456948 SPDYE3A6NKU9 549 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms