RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MYO1CO00159 1063 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 ZNF185O15231 689 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
LINC00959-201ENST00000456581 PPARDQ03181 441 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 BMP15O95972 392 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 MYBL2P10244 700 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 IQUBQ8NA54 791 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 EHD4Q9H223 541 aa13.89□□□□□ -0.19
LINC00959-201ENST00000456581 GDF11O95390 407 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
LINC00959-201ENST00000456581 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 NOVP48745 357 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CASP8Q14790 479 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 STRIP1Q5VSL9 837 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 STYK1Q6J9G0 422 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 ZMYND12Q9H0C1 365 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 AGPAT5Q9NUQ2 364 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CTAGE15A4D2H0 777 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 PPP1R11O60927 126 aaPredicted RBP13.88□□□□□ -0.19
LINC00959-201ENST00000456581 TTLL1O95922 423 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CTAGE8P0CG41 777 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 JAG1P78504 1218 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 BRD3Q15059 726 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CTAGE6Q86UF2 777 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CTAGE4Q8IX94 777 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CEP112Q8N8E3 955 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 PRMT6Q96LA8 375 aaPredicted RBP13.88□□□□□ -0.19
LINC00959-201ENST00000456581 CTAGE1Q96RT6 745 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 NAA15Q9BXJ9 866 aaKnown RBP13.88□□□□□ -0.19
LINC00959-201ENST00000456581 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
LINC00959-201ENST00000456581 B4DLN1 442 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 PPIP5K2O43314 1243 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
LINC00959-201ENST00000456581 TAL1P17542 331 aaPredicted RBP13.87□□□□□ -0.19
LINC00959-201ENST00000456581 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
LINC00959-201ENST00000456581 LIMA1Q9UHB6 759 aaKnown RBP13.87□□□□□ -0.19
LINC00959-201ENST00000456581 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 MYO6Q9UM54 1294 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
LINC00959-201ENST00000456581 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 RAD17O75943 681 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 NDUFA10O95299 355 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 STAT6P42226 847 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 SNAP25P60880 206 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 HERVK_113P62684 666 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 AMPD2Q01433 879 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 UBE2SQ16763 222 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 NAALADL2Q58DX5 795 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 ADGRF4Q8IZF3 695 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 GJA10Q969M2 543 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 LACRTQ9GZZ8 138 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 SMARCAL1Q9NZC9 954 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 RWDD2AQ9UIY3 292 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 RAB21Q9UL25 225 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 MYH10P35580 1976 aa13.87□□□□□ -0.19
LINC00959-201ENST00000456581 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 CYP26C1Q6V0L0 522 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 HDXQ7Z353 690 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 SEPT2Q15019 361 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 TMTC1Q8IUR5 882 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 DAGLBQ8NCG7 672 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 CNKSR1Q969H4 720 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 PSMB7Q99436 277 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 SMCHD1A6NHR9 2005 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 PDE2AO00408 941 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 EDIL3O43854 480 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 PLEKP08567 350 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 EEF2P13639 858 aaKnown RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 FAM193AP78312 1265 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 RRP1BQ14684 758 aaKnown RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 ZNF658Q5TYW1 1059 aaPredicted RBP13.86□□□□□ -0.19
LINC00959-201ENST00000456581 DTHD1Q6ZMT9 781 aa13.86□□□□□ -0.19
LINC00959-201ENST00000456581 PLIN4Q96Q06 1357 aa13.85□□□□□ -0.19
LINC00959-201ENST00000456581 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms