RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 BECN1Q14457 450 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 KRT40Q6A162 431 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 REXO1Q8N1G1 1221 aaKnown RBP20.48■□□□□ 0.87
FAM239A-203ENST00000456563 MORC4Q8TE76 937 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 C8orf76Q96K31 380 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 TINF2Q9BSI4 451 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 PXMP2Q9NR77 195 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 FRMPD4Q14CM0 1322 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 SYNGAP1Q96PV0 1343 aa20.48■□□□□ 0.87
FAM239A-203ENST00000456563 LCTP09848 1927 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 SPDYE3A6NKU9 549 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 B4DLN1 442 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 M0R2N6 131 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 ADAMTS3O15072 1205 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 HMGCRP04035 888 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 ELNP15502 786 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 EDNRBP24530 442 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 ARHGEF16Q5VV41 709 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 IWS1Q96ST2 819 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 MPHOSPH6Q99547 160 aaKnown RBP20.47■□□□□ 0.87
FAM239A-203ENST00000456563 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
FAM239A-203ENST00000456563 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
FAM239A-203ENST00000456563 MMP1P03956 469 aa20.46■□□□□ 0.87
FAM239A-203ENST00000456563 MFSD14CQ5VZR4 134 aa20.46■□□□□ 0.87
FAM239A-203ENST00000456563 ARMCX2Q7L311 632 aa20.46■□□□□ 0.87
FAM239A-203ENST00000456563 PDCD2LQ9BRP1 358 aa20.46■□□□□ 0.87
FAM239A-203ENST00000456563 TMEM260Q9NX78 707 aa20.46■□□□□ 0.87
FAM239A-203ENST00000456563 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 EIF2AK2P19525 551 aaKnown RBP20.45■□□□□ 0.86
FAM239A-203ENST00000456563 CYP2C19P33261 490 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 FOSBP53539 338 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 JAKMIP3Q5VZ66 844 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 EHMT1Q9H9B1 1298 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 NRBP1Q9UHY1 535 aa20.45■□□□□ 0.86
FAM239A-203ENST00000456563 SNAI1O95863 264 aaPredicted RBP20.44■□□□□ 0.86
FAM239A-203ENST00000456563 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
FAM239A-203ENST00000456563 NR3C2P08235 984 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 KRT2P35908 639 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 PGM5Q15124 567 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 SLC9C1Q4G0N8 1177 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 RASGRP4Q8TDF6 673 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 ANO3Q9BYT9 981 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 FOXD4L1Q9NU39 408 aa20.44■□□□□ 0.86
FAM239A-203ENST00000456563 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.44■□□□□ 0.86
FAM239A-203ENST00000456563 INHAP05111 366 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 PDCP20941 246 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 PDE4DQ08499 809 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 TRIM32Q13049 653 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.86
FAM239A-203ENST00000456563 STXBP2Q15833 593 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 MAP3K21Q5TCX8 1036 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 LARP1BQ659C4 914 aaKnown RBP20.43■□□□□ 0.86
FAM239A-203ENST00000456563 XRRA1Q6P2D8 792 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 VSIG10LQ86VR7 867 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
FAM239A-203ENST00000456563 OXER1Q8TDS5 423 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 SH3TC2Q8TF17 1288 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 PGBD1Q96JS3 809 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 CNPY2Q9Y2B0 182 aa20.43■□□□□ 0.86
FAM239A-203ENST00000456563 CCND2P30279 289 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 SREBF1P36956 1147 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 UBXN2AP68543 259 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 CACNB2Q08289 660 aaPredicted RBP20.42■□□□□ 0.86
FAM239A-203ENST00000456563 PCNX4Q63HM2 1172 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 IL31RAQ8NI17 732 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 TNFRSF25Q93038 417 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 ARMC5Q96C12 935 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 KATNBL1Q9H079 304 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
FAM239A-203ENST00000456563 DDX49Q9Y6V7 483 aaKnown RBP20.42■□□□□ 0.86
FAM239A-203ENST00000456563 BTBD18B2RXH4 712 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 EIF3JO75822 258 aaKnown RBP20.41■□□□□ 0.86
FAM239A-203ENST00000456563 CYBAP13498 195 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
FAM239A-203ENST00000456563 ACVR2BQ13705 512 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 KRT25Q7Z3Z0 450 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 VTA1Q9NP79 307 aa20.41■□□□□ 0.86
FAM239A-203ENST00000456563 H3BQV1 296 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 STAM2O75886 525 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 ZNF865P0CJ78 1059 aaPredicted RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 MYCLP12524 364 aaPredicted RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 MRPS9P82933 396 aaKnown RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 ARHGAP4P98171 946 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 NR5A1Q13285 461 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 PRAMEF19Q5SWL8 479 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 COL13A1Q5TAT6 717 aaPredicted RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 IFFO2Q5TF58 517 aa20.4■□□□□ 0.86
FAM239A-203ENST00000456563 FOXP1Q9H334 677 aaPredicted RBP20.4■□□□□ 0.86
FAM239A-203ENST00000456563 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.85
FAM239A-203ENST00000456563 CYP3A4P08684 503 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms