RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 UPF3AQ9H1J1 476 aaKnown RBP13.09□□□□□ -0.31
HDAC9-217ENST00000455069 DOCK5Q9H7D0 1870 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
HDAC9-217ENST00000455069 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 EVI5O60447 810 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.32
HDAC9-217ENST00000455069 SMPD1P17405 629 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-217ENST00000455069 RCAN1P53805 252 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 LRRC26Q2I0M4 334 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 CCSAPQ6IQ19 270 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-217ENST00000455069 SYNE3Q6ZMZ3 975 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 TM6SF1Q9BZW5 370 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 VTA1Q9NP79 307 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
HDAC9-217ENST00000455069 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
HDAC9-217ENST00000455069 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 CST5P28325 142 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 EVCP57679 992 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 FGD1P98174 961 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 ARRDC4Q8NCT1 418 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 IL31RAQ8NI17 732 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 IL17RAQ96F46 866 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 PXMP2Q9NR77 195 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
HDAC9-217ENST00000455069 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
HDAC9-217ENST00000455069 MEIS2O14770 477 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 ARIH2O95376 493 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 GJA9P57773 515 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 NKX3-2P78367 333 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 PDE4DQ08499 809 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 RNF180Q86T96 592 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 TLK2Q86UE8 772 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 SAMD3Q8N6K7 520 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 PDCD2LQ9BRP1 358 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-217ENST00000455069 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
HDAC9-217ENST00000455069 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
HDAC9-217ENST00000455069 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
HDAC9-217ENST00000455069 NR3C2P08235 984 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
HDAC9-217ENST00000455069 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
HDAC9-217ENST00000455069 ANAPC15P60006 121 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 BEX3Q00994 111 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 TRAF1Q13077 416 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 SNX17Q15036 470 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 NTRK3Q16288 839 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 KCNA10Q16322 511 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 DUSP28Q4G0W2 176 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 IQSEC1Q6DN90 963 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
HDAC9-217ENST00000455069 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
HDAC9-217ENST00000455069 A0A1W2PPC1 479 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 RGS20O76081 388 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 ACLYP53396 1101 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 PGM5Q15124 567 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 CCDC62Q6P9F0 684 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 FCHSD1Q86WN1 690 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 COPS5Q92905 334 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 TSEN34Q9BSV6 310 aaKnown RBP13.04□□□□□ -0.32
HDAC9-217ENST00000455069 WDR11Q9BZH6 1224 aa13.04□□□□□ -0.32
HDAC9-217ENST00000455069 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
HDAC9-217ENST00000455069 STXBP3O00186 592 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 PIK3CDO00329 1044 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-217ENST00000455069 PPFIA3O75145 1194 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 ASGR1P07306 291 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
HDAC9-217ENST00000455069 PPP2R5BQ15173 497 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 PKN1Q16512 942 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 UBE2SQ16763 222 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
HDAC9-217ENST00000455069 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 ZFP91Q96JP5 570 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-217ENST00000455069 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms