RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 IFNAR1P17181 557 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 ADCYAP1R1P41586 468 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 GJA9P57773 515 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 TYW1BQ6NUM6 668 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 CCDC82Q8N4S0 544 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 C11orf49Q9H6J7 331 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 B4DLN1 442 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 STXBP3O00186 592 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 CTAGE5O15320 804 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 HOXA13P31271 388 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 MRPL12P52815 198 aaKnown RBP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 PDE4DQ08499 809 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 CCSAPQ6IQ19 270 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 KIF2CQ99661 725 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 PDGFCQ9NRA1 345 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
HDAC4-205ENST00000454542 PHF24Q9UPV7 400 aa16.34■□□□□ 0.21
HDAC4-205ENST00000454542 MYADML2A6NDP7 307 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 PGK1P00558 417 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 SMPD1P17405 629 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 EIF2AK2P19525 551 aaKnown RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 TNFAIP2Q03169 654 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 SNX17Q15036 470 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 PGM5Q15124 567 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 PKN1Q16512 942 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 DUSP28Q4G0W2 176 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 GJC2Q5T442 439 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 IQSEC1Q6DN90 963 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 EEPD1Q7L9B9 569 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 RNF180Q86T96 592 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 IL31RAQ8NI17 732 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-205ENST00000454542 Q9Y3F1 56 aa16.33■□□□□ 0.2
HDAC4-205ENST00000454542 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 NR3C2P08235 984 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 SCG2P13521 617 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 AK2P54819 239 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 TSEN34Q9BSV6 310 aaKnown RBP16.32■□□□□ 0.2
HDAC4-205ENST00000454542 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
HDAC4-205ENST00000454542 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-205ENST00000454542 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 NKRFO15226 690 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC4-205ENST00000454542 PFKFB2O60825 505 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 ARIH2O95376 493 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
HDAC4-205ENST00000454542 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 STXBP2Q15833 593 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 USP17L6PQ6QN14 398 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 VSIG10LQ86VR7 867 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 PHKBQ93100 1093 aa16.31■□□□□ 0.2
HDAC4-205ENST00000454542 MOXD2PA6NHM9 499 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 EIF3JO75822 258 aaKnown RBP16.3■□□□□ 0.2
HDAC4-205ENST00000454542 RGS20O76081 388 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 PTGS1P23219 599 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 CLK2P49760 499 aaKnown RBP16.3■□□□□ 0.2
HDAC4-205ENST00000454542 NAPAP54920 295 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 IRX5P78411 483 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-205ENST00000454542 SCRN1Q12765 414 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 CUL5Q93034 780 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
HDAC4-205ENST00000454542 WDR11Q9BZH6 1224 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
HDAC4-205ENST00000454542 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 STAM2O75886 525 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 CCND2P30279 289 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
HDAC4-205ENST00000454542 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 UBE2SQ16763 222 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 INPP4AQ96PE3 977 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-205ENST00000454542 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 SPC25Q9HBM1 224 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
HDAC4-205ENST00000454542 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 A0A1W2PQ45 241 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-205ENST00000454542 A0A1W2PQY0 241 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 LARGE1O95461 756 aa16.28■□□□□ 0.2
HDAC4-205ENST00000454542 C6orf222P0C671 652 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms