RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 BAZ2BQ9UIF8 2168 aaKnown RBP18.06■□□□□ 0.48
VCX3B-204ENST00000453306 STXBP3O00186 592 aa18.06■□□□□ 0.48
VCX3B-204ENST00000453306 SCG2P13521 617 aa18.06■□□□□ 0.48
VCX3B-204ENST00000453306 MTMR10Q9NXD2 777 aa18.06■□□□□ 0.48
VCX3B-204ENST00000453306 ORC3Q9UBD5 711 aaPredicted RBP18.06■□□□□ 0.48
VCX3B-204ENST00000453306 ATP11BQ9Y2G3 1177 aa18.06■□□□□ 0.48
VCX3B-204ENST00000453306 CTDP1Q9Y5B0 961 aaPredicted RBP18.06■□□□□ 0.48
VCX3B-204ENST00000453306 MYCNP04198 464 aaPredicted RBP18.05■□□□□ 0.48
VCX3B-204ENST00000453306 KCTD2Q14681 263 aa18.05■□□□□ 0.48
VCX3B-204ENST00000453306 SLC39A5Q6ZMH5 540 aa18.05■□□□□ 0.48
VCX3B-204ENST00000453306 Q7L0L9 218 aa18.05■□□□□ 0.48
VCX3B-204ENST00000453306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.05■□□□□ 0.48
VCX3B-204ENST00000453306 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
VCX3B-204ENST00000453306 DIS3Q9Y2L1 958 aaKnown RBP18.05■□□□□ 0.48
VCX3B-204ENST00000453306 STK36Q9NRP7 1315 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 NPY5RQ15761 445 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 ANO1Q5XXA6 986 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
VCX3B-204ENST00000453306 HEATR3Q7Z4Q2 680 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 CHST13Q8NET6 341 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 FGD4Q96M96 766 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
VCX3B-204ENST00000453306 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 BARHL2Q9NY43 387 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 VPS54Q9P1Q0 977 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 COL20A1Q9P218 1284 aa18.04■□□□□ 0.48
VCX3B-204ENST00000453306 ASTN1O14525 1302 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 ABCB11O95342 1321 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 COL6A3P12111 3177 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 DNAJC25-GNG10A0A024R161 153 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 DEXIO95424 95 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 RARBP10826 455 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
VCX3B-204ENST00000453306 LRRC41Q15345 812 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 PRAMEF19Q5SWL8 479 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
VCX3B-204ENST00000453306 SEC63Q9UGP8 760 aaKnown RBP18.03■□□□□ 0.48
VCX3B-204ENST00000453306 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
VCX3B-204ENST00000453306 SMCHD1A6NHR9 2005 aa18.03■□□□□ 0.48
VCX3B-204ENST00000453306 PGK2P07205 417 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 CNTN2Q02246 1040 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 C1orf53Q5VUE5 145 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 SLC30A10Q6XR72 485 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 RNF180Q86T96 592 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 TINF2Q9BSI4 451 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 ACAD9Q9H845 621 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 XPNPEP3Q9NQH7 507 aa18.02■□□□□ 0.48
VCX3B-204ENST00000453306 PRDM5Q9NQX1 630 aaPredicted RBP18.02■□□□□ 0.48
VCX3B-204ENST00000453306 MRPL11Q9Y3B7 192 aaKnown RBP18.02■□□□□ 0.48
VCX3B-204ENST00000453306 COL11A1P12107 1806 aaPredicted RBP18.02■□□□□ 0.47
VCX3B-204ENST00000453306 MEIS2O14770 477 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 CDKL5O76039 1030 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 ADCYAP1R1P41586 468 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 FOSBP53539 338 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 RPS6P62753 249 aaKnown RBP18.01■□□□□ 0.47
VCX3B-204ENST00000453306 GHRHRQ02643 423 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 SNX17Q15036 470 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 USP17L6PQ6QN14 398 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 TRIM22Q8IYM9 498 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 SYTL5Q8TDW5 730 aaPredicted RBP18.01■□□□□ 0.47
VCX3B-204ENST00000453306 ALG1Q9BT22 464 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 CYP39A1Q9NYL5 469 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 KCNJ14Q9UNX9 436 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
VCX3B-204ENST00000453306 RBM19Q9Y4C8 960 aaKnown RBP18.01■□□□□ 0.47
VCX3B-204ENST00000453306 SOWAHBA6NEL2 793 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 POTEB2H3BUK9 544 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 AKR1A1P14550 325 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 HOXA13P31271 388 aaPredicted RBP18■□□□□ 0.47
VCX3B-204ENST00000453306 HSD17B4P51659 736 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
VCX3B-204ENST00000453306 ZNF792Q3KQV3 632 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 TRIM60Q495X7 471 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 NSMFQ6X4W1 530 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
VCX3B-204ENST00000453306 PNMA2Q9UL42 364 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
VCX3B-204ENST00000453306 SMCO2A6NFE2 343 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 GJB2P29033 226 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 NAPAP54920 295 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 UBE2SQ16763 222 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 ZNF697Q5TEC3 545 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 FAM133AQ8N9E0 248 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 FERMT2Q96AC1 680 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 TAAR1Q96RJ0 339 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 ZMYND12Q9H0C1 365 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 PSTPIP2Q9H939 334 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 TMEM260Q9NX78 707 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 FBXO40Q9UH90 709 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 PHF24Q9UPV7 400 aa17.99■□□□□ 0.47
VCX3B-204ENST00000453306 M0R2N6 131 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 EDIL3O43854 480 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 CFBP00751 764 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 RNF207Q6ZRF8 634 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 OXER1Q8TDS5 423 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms