RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 VPS50Q96JG6 964 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP53-202ENST00000450251 C1orf115Q9H7X2 142 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CD248Q9HCU0 757 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TRPC7Q9HCX4 862 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 EURLQ9NYK6 297 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 HACD3Q9P035 362 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 EMC3Q9P0I2 261 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RSL24D1Q9UHA3 163 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 RABGEF1Q9UJ41 708 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SCAF8Q9UPN6 1271 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 R3HDM2Q9Y2K5 976 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP53-202ENST00000450251 SAMD9LQ8IVG5 1584 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 DUOX2Q9NRD8 1548 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ASAP2O43150 1006 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 PRPF6O94906 941 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 GNA14O95837 355 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 HSPA8P11142 646 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 KRT13P13646 458 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 IDO1P14902 403 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NQO1P15559 274 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 GNAT2P19087 354 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 C4BPBP20851 252 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SERPINB3P29508 390 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 HMOX2P30519 316 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CA8P35219 290 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CD151P48509 253 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ATP1A2P50993 1020 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 XIAPP98170 497 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CDR2Q01850 454 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CAV1Q03135 178 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CCDC15Q0P6D6 951 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 MTX1Q13505 466 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 DNAL1Q4LDG9 190 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ATAD3BQ5T9A4 648 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NAA35Q5VZE5 725 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TOGARAM2Q6ZUX3 1019 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ANKRD13AQ8IZ07 590 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 OR8K1Q8NGG5 319 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 MORC4Q8TE76 937 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SH3TC2Q8TF17 1288 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 OTUD5Q96G74 571 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 XPO6Q96QU8 1125 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP53-202ENST00000450251 PAGR1Q9BTK6 254 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 KAT14Q9H8E8 782 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 PFDN4Q9NQP4 134 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TRAF3IP3Q9Y228 551 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP53-202ENST00000450251 ABCC5O15440 1437 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ITIH6Q6UXX5 1313 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 PASKQ96RG2 1323 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NUTM2FA1L443 756 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SMIM23A6NLE4 172 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ZNF839A8K0R7 811 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RAD21O60216 631 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CTNND1O60716 968 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 DKC1O60832 514 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP53-202ENST00000450251 STAM2O75886 525 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 AGTP01019 485 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 APOEP02649 317 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 MYL1P05976 194 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CMA1P23946 247 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 COPB2P35606 906 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CCZ1BP86790 482 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CCZ1P86791 482 aaPredicted RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 BNC1Q01954 994 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 PAK1Q13153 545 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RPS6KA1Q15418 735 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 RARS2Q5T160 578 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 NUTM2GQ5VZR2 741 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 TBC1D1Q86TI0 1168 aaPredicted RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 DZIP3Q86Y13 1208 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 LSM14AQ8ND56 463 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 NAP1L4Q99733 375 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 RAD21L1Q9H4I0 556 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 XAB2Q9HCS7 855 aaKnown RBP2.4□□□□□ -2.03
USP53-202ENST00000450251 DISC1Q9NRI5 854 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 ECHDC1Q9NTX5 307 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 AIPL1Q9NZN9 384 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 AP4S1Q9Y587 144 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 PTCH1Q13635 1447 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CAMSAP1Q5T5Y3 1602 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 SBNO1A3KN83 1393 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 NEURL4Q96JN8 1562 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 LMTK2Q8IWU2 1503 aa2.4□□□□□ -2.03
USP53-202ENST00000450251 CROCC2H7BZ55 1655 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ATP10BO94823 1461 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ZNF518AQ6AHZ1 1483 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP42A6NI28 874 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 A8MXQ7 604 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MATN2O00339 956 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 BIN1O00499 593 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PPP6R2O75170 966 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ANP32DO95626 131 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 APOA1P02647 267 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 LSP1P33241 339 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 GNL1P36915 607 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 MTHFSP49914 203 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms