RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SLC4A7Q9Y6M7 1214 aa20.48■□□□□ 0.87
FAM3A-216ENST00000449971 GBF1Q92538 1859 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 E7EWF7 191 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 NEFLP07196 543 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 FSCN1Q16658 493 aaKnown RBP20.47■□□□□ 0.87
FAM3A-216ENST00000449971 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 RALYLQ86SE5 291 aaKnown RBP20.47■□□□□ 0.87
FAM3A-216ENST00000449971 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 KATNBL1Q9H079 304 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 CPVLQ9H3G5 476 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 TAF6LQ9Y6J9 622 aa20.47■□□□□ 0.87
FAM3A-216ENST00000449971 RFXAPO00287 272 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 B4GALT4O60513 344 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 KCNQ1P51787 676 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 FAM133AQ8N9E0 248 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
FAM3A-216ENST00000449971 WNT8AQ9H1J5 351 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 CYP39A1Q9NYL5 469 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 PNMA2Q9UL42 364 aa20.46■□□□□ 0.87
FAM3A-216ENST00000449971 SOWAHBA6NEL2 793 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 IFIT3O14879 490 aaKnown RBP20.45■□□□□ 0.86
FAM3A-216ENST00000449971 ZEB2O60315 1214 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
FAM3A-216ENST00000449971 SEC23AQ15436 765 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 ASPRV1Q53RT3 343 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 DEFB128Q7Z7B8 93 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 FBXO16Q8IX29 292 aaPredicted RBP20.45■□□□□ 0.86
FAM3A-216ENST00000449971 PDGFCQ9NRA1 345 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 LAMA4Q16363 1823 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 GRIN2DO15399 1336 aa20.45■□□□□ 0.86
FAM3A-216ENST00000449971 ERICH2A1L162 156 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 DHX16O60231 1041 aaKnown RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 CABYRO75952 493 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 ATP2A2P16615 1042 aaKnown RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 SMPD1P17405 629 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 BAATQ14032 418 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 STOX1Q6ZVD7 989 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 RPUSD2Q8IZ73 545 aaKnown RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
FAM3A-216ENST00000449971 GNEQ9Y223 722 aaKnown RBP20.44■□□□□ 0.86
FAM3A-216ENST00000449971 BDP1A6H8Y1 2624 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 ASB14A6NK59 587 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 NFIBO00712 420 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 CYP2C9P11712 490 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 BMP1P13497 986 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 TTLL4Q14679 1199 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 ADGRF4Q8IZF3 695 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 SLC43A3Q8NBI5 491 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 PCDHA11Q9Y5I1 949 aa20.43■□□□□ 0.86
FAM3A-216ENST00000449971 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
FAM3A-216ENST00000449971 PTPDC1A2A3K4 754 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 SART3Q15020 963 aaKnown RBP20.42■□□□□ 0.86
FAM3A-216ENST00000449971 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
FAM3A-216ENST00000449971 USH1GQ495M9 461 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 KRT40Q6A162 431 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 PURBQ96QR8 312 aaKnown RBP20.42■□□□□ 0.86
FAM3A-216ENST00000449971 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
FAM3A-216ENST00000449971 GTPBP6O43824 516 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-216ENST00000449971 CA3P07451 260 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 WTAPQ15007 396 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 AAK1Q2M2I8 961 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 TMEM67Q5HYA8 995 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 PPP1R13LQ8WUF5 828 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 C1QTNF1Q9BXJ1 281 aa20.41■□□□□ 0.86
FAM3A-216ENST00000449971 TRMT13Q9NUP7 481 aaKnown RBP20.41■□□□□ 0.86
FAM3A-216ENST00000449971 KLRF2D3W0D1 207 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 SLC27A2O14975 620 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 CALML3P27482 149 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 NKX3-2P78367 333 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 JMJD4Q9H9V9 463 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 SENP2Q9HC62 589 aa20.4■□□□□ 0.86
FAM3A-216ENST00000449971 CDC45O75419 566 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 MYL3P08590 195 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 ANTXR2P58335 489 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 QRICH1Q2TAL8 776 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 FAM47CQ5HY64 1035 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 CREB3L3Q68CJ9 461 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 SLC30A10Q6XR72 485 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 MB21D2Q8IYB1 491 aaPredicted RBP20.39■□□□□ 0.85
FAM3A-216ENST00000449971 ARNTL2Q8WYA1 636 aa20.39■□□□□ 0.85
FAM3A-216ENST00000449971 ALDH8A1Q9H2A2 487 aaPredicted RBP20.39■□□□□ 0.85
FAM3A-216ENST00000449971 ADD3Q9UEY8 706 aaKnown RBP20.39■□□□□ 0.85
FAM3A-216ENST00000449971 EPOPA6NHQ4 379 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 NECTIN1Q15223 517 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 IQSEC1Q6DN90 963 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 TAPT1Q6NXT6 567 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 FBXO11Q86XK2 927 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 IGDCC4Q8TDY8 1250 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 VWCEQ96DN2 955 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 EPHX3Q9H6B9 360 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 MAD2L2Q9UI95 211 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms