RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TRPC6Q9Y210 931 aa14.91□□□□□ -0.02
SYNGAP1-204ENST00000449372 HIBADHP31937 336 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 SEC24CP53992 1094 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MECOMQ03112 1051 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MYO1EQ12965 1108 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 GRAPQ13588 217 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 LONRF3Q496Y0 759 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 PRR5LQ6MZQ0 368 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 SH2D3CQ8N5H7 860 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 GRAPLQ8TC17 118 aaPredicted RBP14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 CAPZA3Q96KX2 299 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 ABCF2Q9UG63 623 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 ENC1O14682 589 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MIS18BP1Q6P0N0 1132 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 NLRP14Q86W24 1093 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 AIFM3Q96NN9 605 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MMP1P03956 469 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 RXRAP19793 462 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 PDE4BQ07343 736 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MORC3Q14149 939 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 METTL16Q86W50 562 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 MYCBPAPQ8TBZ2 947 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 NUP133Q8WUM0 1156 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 RRP36Q96EU6 259 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 HDAC6Q9UBN7 1215 aa14.9□□□□□ -0.02
SYNGAP1-204ENST00000449372 OPLAHO14841 1288 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 N4BP3O15049 544 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 CALM1P0DP23 149 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 CALM2P0DP24 149 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 CALM3P0DP25 149 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 KRT83P78385 493 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 NT5DC1Q5TFE4 455 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 TFCP2L1Q9NZI6 479 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 MYH6P13533 1939 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 AENQ8WTP8 325 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 SERTAD1Q9UHV2 236 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 MROH7-TTC4A0A0A0MT08 1334 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 ITIH6Q6UXX5 1313 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 A0A1B0GTH6 734 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 UBE2Q2LH0YL09 131 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 SRGAP2O75044 1071 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 PPP1R37O75864 691 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 RTN3O95197 1032 aaPredicted RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 PYGLP06737 847 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 PTGISQ16647 500 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 C6orf89Q6UWU4 347 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 PROM2Q8N271 834 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 NUP88Q99567 741 aaPredicted RBP14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 BAIAP2L1Q9UHR4 511 aa14.89□□□□□ -0.03
SYNGAP1-204ENST00000449372 DNM1LO00429 736 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 NNTQ13423 1086 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 NR1I3Q14994 352 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 IQCDQ96DY2 449 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 MYL10Q9BUA6 226 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 SAR1BQ9Y6B6 198 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 KLRG2A4D1S0 409 aaPredicted RBP14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 HSF2BPO75031 334 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 SLC30A9Q6PML9 568 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 AATFQ9NY61 560 aaKnown RBP eCLIP14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 E7EVH7 732 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 PRDX5P30044 214 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 EVX2Q03828 476 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 CAGE1Q8TC20 777 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 PHKBQ93100 1093 aa14.88□□□□□ -0.03
SYNGAP1-204ENST00000449372 SMNDC1O75940 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 FAM107AO95990 144 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 ZNF18P17022 549 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 CDC25CP30307 473 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 PPP1R2P41236 205 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 NOD2Q9HC29 1040 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 GUCA1BQ9UMX6 200 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 MGRN1O60291 552 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 CYLC1P35663 651 aaPredicted RBP14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 KRT2P35908 639 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 KLHL10Q6JEL2 608 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 CHCHD3Q9NX63 227 aaKnown RBP14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 LEMD3Q9Y2U8 911 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 NAV1Q8NEY1 1877 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 TEX33O43247 280 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 NOC3LQ8WTT2 800 aaKnown RBP14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 ESR2Q92731 530 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 OSBPL7Q9BZF2 842 aa14.87□□□□□ -0.03
SYNGAP1-204ENST00000449372 ATP2C2O75185 946 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 ATP6V1G2O95670 118 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 NEFHP12036 1026 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 ALS2CLQ60I27 953 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 KDM7AQ6ZMT4 941 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms