RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 PRKAB2O43741 272 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 H2AFZP0C0S5 128 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 NEDD9Q14511 834 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 CCDC62Q6P9F0 684 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 H2AFVQ71UI9 128 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 PKNOX2Q96KN3 472 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 CEP170P1Q96L14 293 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 RIPOR2Q9Y4F9 1068 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 PCDHB4Q9Y5E5 795 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 ABCC12Q96J65 1359 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 PTPN12Q05209 780 aaKnown RBP11.15□□□□□ -0.62
SCN10A-201ENST00000449082 SLC39A14Q15043 492 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 BZW2Q9Y6E2 419 aaKnown RBP11.15□□□□□ -0.62
SCN10A-201ENST00000449082 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.62
SCN10A-201ENST00000449082 A6NJR5 290 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 KRIT1O00522 736 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
SCN10A-201ENST00000449082 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 TMEM206Q9H813 350 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
SCN10A-201ENST00000449082 ARHGEF37A1IGU5 675 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.63
SCN10A-201ENST00000449082 PLCB4Q15147 1175 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 MUM1L1Q5H9M0 696 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 MAP7D3Q8IWC1 876 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.63
SCN10A-201ENST00000449082 IFT122Q9HBG6 1241 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 SEPT10Q9P0V9 454 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 NCAPD2Q15021 1401 aa11.15□□□□□ -0.63
SCN10A-201ENST00000449082 TYW5A2RUC4 315 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 ADCY8P40145 1251 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 ATP11AP98196 1134 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 NME8Q8N427 588 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 PSAPP07602 524 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 RASGRP4Q8TDF6 673 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 CNOT6LQ96LI5 555 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 MYO3BQ8WXR4 1341 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 STK17AQ9UEE5 414 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 NDUFAB1O14561 156 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 LMNB1P20700 586 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 FANCLQ9NW38 375 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 FAM170AA1A519 330 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 NR2F2P24468 414 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 CDK8P49336 464 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 RNASELQ05823 741 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 COA7Q96BR5 231 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
SCN10A-201ENST00000449082 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
SCN10A-201ENST00000449082 C21orf2O43822 256 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF131P52739 623 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 PRPSAP1Q14558 356 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 DIXDC1Q155Q3 683 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 BUB1O43683 1085 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 ARHGAP24Q8N264 748 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 GOLGA8CPA6NN73 597 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 BFSP1Q12934 665 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 CDC37Q16543 378 aaPredicted RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 KRT71Q3SY84 523 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 PPP1R2P3Q6NXS1 205 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 BBS5Q8N3I7 341 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 HAUS4Q9H6D7 363 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 NARFQ9UHQ1 456 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 IPO11Q9UI26 975 aaKnown RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 H7C1W4 665 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 MMP1P03956 469 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 MYL1P05976 194 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 ZNF853P0CG23 659 aa11.13□□□□□ -0.63
SCN10A-201ENST00000449082 NSUN7Q8NE18 718 aaKnown RBP11.13□□□□□ -0.63
SCN10A-201ENST00000449082 OSBP2Q969R2 916 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms