RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MMP19Q99542 508 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 ZMYND12Q9H0C1 365 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 CWC22Q9HCG8 908 aaKnown RBP8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 VPS54Q9P1Q0 977 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 GJD2Q9UKL4 321 aa8.68□□□□□ -1.02
AC004540.1-206ENST00000448056 ESYT2A0FGR8 921 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GCOM1H8Y6P7 765 aaPredicted RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 MEIS2O14770 477 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 TNPO2O14787 897 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GNRH1P01148 92 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 HSP90AA1P07900 732 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 POLR2MP0CAP2 368 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 XBP1P17861 261 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 ANP32AP39687 249 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 CTCFP49711 727 aaPredicted RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 HSD17B4P51659 736 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GHRHRQ02643 423 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 BAATQ14032 418 aaPredicted RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GRB14Q14449 540 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 KCTD2Q14681 263 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 ARHGEF6Q15052 776 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 PARP14Q460N5 1801 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 MORN1Q5T089 497 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 NSMFQ6X4W1 530 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 CD99L2Q8TCZ2 262 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 CCDC12Q8WUD4 166 aaPredicted RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 C6orf50Q9HD87 102 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 RIC8AQ9NPQ8 531 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 A1CFQ9NQ94 594 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 GJB4Q9NTQ9 266 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 MAP3K20Q9NYL2 800 aaKnown RBP8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 CYP39A1Q9NYL5 469 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 IVNS1ABPQ9Y6Y0 642 aa8.67□□□□□ -1.02
AC004540.1-206ENST00000448056 A0A0G2JMZ2 1700 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 PFASO15067 1338 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 DNAJC25-GNG10A0A024R161 153 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 COBLO75128 1261 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 CFBP00751 764 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 PGK2P07205 417 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 CALML3P27482 149 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 HOXD10P28358 340 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 ADORA2AP29274 412 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 GNA11P29992 359 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 HOXA13P31271 388 aaPredicted RBP8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 ADCY7P51828 1080 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 LBX1P52954 281 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 NLRP5P59047 1200 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 RPS6P62753 249 aaKnown RBP8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 TRIM29Q14134 588 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 LARP1BQ659C4 914 aaKnown RBP8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 KRT40Q6A162 431 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 GALNT17Q6IS24 598 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 USP17L6PQ6QN14 398 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 DPP9Q86TI2 863 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 TEX2Q8IWB9 1127 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 CCDC148Q8NFR7 591 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 SYTL5Q8TDW5 730 aaPredicted RBP8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 USP6NLQ92738 828 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 CUL5Q93034 780 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 C8orf76Q96K31 380 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
AC004540.1-206ENST00000448056 HOXC6P09630 235 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 XRCC5P13010 732 aaKnown RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 FLT3LGP49771 235 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 CNTN2Q02246 1040 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 MAP2K5Q13163 448 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 NPY5RQ15761 445 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 UBE2SQ16763 222 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 ZNF792Q3KQV3 632 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 SLC30A10Q6XR72 485 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 BLIDQ8IZY5 108 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 FAM133AQ8N9E0 248 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 DAGLBQ8NCG7 672 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 BICD2Q8TD16 824 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 PURBQ96QR8 312 aaKnown RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 TAAR1Q96RJ0 339 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 SLC5A4Q9NY91 659 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 COL20A1Q9P218 1284 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 BIN2Q9UBW5 565 aaPredicted RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 SRRDQ9UH36 339 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 PCDHA4Q9UN74 947 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 GABRQQ9UN88 632 aa8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 DIS3Q9Y2L1 958 aaKnown RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
AC004540.1-206ENST00000448056 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
AC004540.1-206ENST00000448056 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms