RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 DGKHQ86XP1 1220 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 DNERQ8NFT8 737 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
VSTM1-206ENST00000447872 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-206ENST00000447872 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 RAD50Q92878 1312 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 NT5C2P49902 561 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 ZKSCAN3Q9BRR0 538 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
VSTM1-206ENST00000447872 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 SLC28A3Q9HAS3 691 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
VSTM1-206ENST00000447872 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
VSTM1-206ENST00000447872 PLXNA1Q9UIW2 1896 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
VSTM1-206ENST00000447872 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 CYP2C9P11712 490 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 EDNRBP24530 442 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 USH1GQ495M9 461 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 FAM47CQ5HY64 1035 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
VSTM1-206ENST00000447872 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
VSTM1-206ENST00000447872 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
VSTM1-206ENST00000447872 TNKSO95271 1327 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 NEDD4P46934 1319 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 A6NJR5 290 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 HIP1O00291 1037 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 KDM4AO75164 1064 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 PFKMP08237 780 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
VSTM1-206ENST00000447872 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 USP38Q8NB14 1042 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 RETREG2Q8NC44 543 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 PPM1EQ8WY54 764 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 SNX21Q969T3 373 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 SCLYQ96I15 445 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
VSTM1-206ENST00000447872 MAF1Q9H063 256 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 NCOR1O75376 2440 aa12.11□□□□□ -0.47
VSTM1-206ENST00000447872 MYH4Q9Y623 1939 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 IGFBP4P22692 258 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 RABGGTBP53611 331 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 MCF2L2Q86YR7 1114 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 YBX2Q9Y2T7 364 aaKnown RBP12.1□□□□□ -0.47
VSTM1-206ENST00000447872 ABCB11O95342 1321 aa12.1□□□□□ -0.47
VSTM1-206ENST00000447872 B4E1Z4 1266 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
VSTM1-206ENST00000447872 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
VSTM1-206ENST00000447872 ACTN1P12814 892 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 RFC2P35250 354 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
VSTM1-206ENST00000447872 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
VSTM1-206ENST00000447872 COPS5Q92905 334 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 KIF2CQ99661 725 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 KRT23Q9C075 422 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms