RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
RFC4-208ENST00000447345 CUL5Q93034 780 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
RFC4-208ENST00000447345 VTA1Q9NP79 307 aa13.73□□□□□ -0.21
RFC4-208ENST00000447345 B4DLN1 442 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 STXBP3O00186 592 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 LARGE1O95461 756 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 EDNRBP24530 442 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 GHRHRQ02643 423 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 SCRN1Q12765 414 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 ANKRD1Q15327 319 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 NTRK3Q16288 839 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 TAPT1Q6NXT6 567 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 ZNF274Q96GC6 653 aaPredicted RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 SLKQ9H2G2 1235 aaPredicted RBP13.72□□□□□ -0.21
RFC4-208ENST00000447345 C11orf49Q9H6J7 331 aa13.72□□□□□ -0.21
RFC4-208ENST00000447345 LOC102724159A0A0B4J2E5 919 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 MYADML2A6NDP7 307 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 KBTBD13C9JR72 458 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 MEIS2O14770 477 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 SCG2P13521 617 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 IFNAR1P17181 557 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 SMPD1P17405 629 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
RFC4-208ENST00000447345 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.21
RFC4-208ENST00000447345 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
RFC4-208ENST00000447345 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 NECAB2Q7Z6G3 386 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 KIF2CQ99661 725 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
RFC4-208ENST00000447345 MAF1Q9H063 256 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.21
RFC4-208ENST00000447345 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
RFC4-208ENST00000447345 DNM1LO00429 736 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 PRPF3O43395 683 aaKnown RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 ADAMTS4O75173 837 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 DUSP11O75319 330 aaKnown RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 NR3C2P08235 984 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 ADCY7P51828 1080 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 PGM5Q15124 567 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 LRRC41Q15345 812 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 STXBP2Q15833 593 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 PKN1Q16512 942 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 ME3Q16798 604 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 PPP1R18Q6NYC8 613 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 PDCD2LQ9BRP1 358 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 ALDH8A1Q9H2A2 487 aaPredicted RBP13.7□□□□□ -0.22
RFC4-208ENST00000447345 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
RFC4-208ENST00000447345 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 PFKFB2O60825 505 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 ARIH2O95376 493 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 CCND2P30279 289 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 BEX3Q00994 111 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 RNF180Q86T96 592 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
RFC4-208ENST00000447345 IWS1Q96ST2 819 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
RFC4-208ENST00000447345 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
RFC4-208ENST00000447345 CEP290O15078 2479 aa13.69□□□□□ -0.22
RFC4-208ENST00000447345 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
RFC4-208ENST00000447345 SORBS3O60504 671 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
RFC4-208ENST00000447345 CAPN2P17655 700 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
RFC4-208ENST00000447345 IQSEC1Q6DN90 963 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 SCFD2Q8WU76 684 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 COPS5Q92905 334 aa13.68□□□□□ -0.22
RFC4-208ENST00000447345 GTF3C6Q969F1 213 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms