RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CENPFP49454 3210 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 ESYT2A0FGR8 921 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 POTEFA5A3E0 1075 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 STXBP3O00186 592 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 MEIS2O14770 477 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 DEXIO95424 95 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 AKR1A1P14550 325 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 NAPAP54920 295 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 PRAMEF19Q5SWL8 479 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 LHX8Q68G74 356 aa25.29■■□□□ 1.64
APOE-204ENST00000446996 GPKOWQ92917 476 aaPredicted RBP eCLIP25.29■■□□□ 1.64
APOE-204ENST00000446996 CNGA1P29973 690 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 SMARCC2Q8TAQ2 1214 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 RIC8AQ9NPQ8 531 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 SH3GLB2Q9NR46 395 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 PXMP2Q9NR77 195 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 SH2B1Q9NRF2 756 aaPredicted RBP25.28■■□□□ 1.64
APOE-204ENST00000446996 OGDHLQ9ULD0 1010 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 FAM184BQ9ULE4 1060 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 STK36Q9NRP7 1315 aa25.28■■□□□ 1.64
APOE-204ENST00000446996 HOXA13P31271 388 aaPredicted RBP25.27■■□□□ 1.64
APOE-204ENST00000446996 MLLT1Q03111 559 aaPredicted RBP25.27■■□□□ 1.64
APOE-204ENST00000446996 PDE4DQ08499 809 aa25.27■■□□□ 1.64
APOE-204ENST00000446996 ARHGEF16Q5VV41 709 aa25.27■■□□□ 1.64
APOE-204ENST00000446996 ANKLE1Q8NAG6 615 aa25.27■■□□□ 1.64
APOE-204ENST00000446996 FRMPD3Q5JV73 1810 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 LARGE1O95461 756 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 MCM2P49736 904 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 SOX10P56693 466 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 STXBP2Q15833 593 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 TYW1BQ6NUM6 668 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 CCDC148Q8NFR7 591 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 PDCD2LQ9BRP1 358 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 ZMYND12Q9H0C1 365 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 ZHX1Q9UKY1 873 aaPredicted RBP25.26■■□□□ 1.63
APOE-204ENST00000446996 FRMPD4Q14CM0 1322 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 LRRC37A2A6NM11 1700 aa25.26■■□□□ 1.63
APOE-204ENST00000446996 RBM47A0AV96 593 aaKnown RBP25.25■■□□□ 1.63
APOE-204ENST00000446996 SMCO2A6NFE2 343 aa25.25■■□□□ 1.63
APOE-204ENST00000446996 TFRCP02786 760 aaKnown RBP25.25■■□□□ 1.63
APOE-204ENST00000446996 NR3C2P08235 984 aa25.25■■□□□ 1.63
APOE-204ENST00000446996 MCTP2Q6DN12 878 aa25.25■■□□□ 1.63
APOE-204ENST00000446996 IQSEC1Q6DN90 963 aa25.25■■□□□ 1.63
APOE-204ENST00000446996 USP17L6PQ6QN14 398 aa25.25■■□□□ 1.63
APOE-204ENST00000446996 NOL8Q76FK4 1167 aaKnown RBP25.25■■□□□ 1.63
APOE-204ENST00000446996 FOSP01100 380 aaPredicted RBP25.24■■□□□ 1.63
APOE-204ENST00000446996 EN2P19622 333 aaPredicted RBP25.24■■□□□ 1.63
APOE-204ENST00000446996 GNA11P29992 359 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 ADCY7P51828 1080 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 CCDC144BQ3MJ40 725 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 TAPT1Q6NXT6 567 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 XRRA1Q6P2D8 792 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 FCHSD1Q86WN1 690 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 SHISA4Q96DD7 197 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 C6orf50Q9HD87 102 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 KIAA1217Q5T5P2 1943 aa25.24■■□□□ 1.63
APOE-204ENST00000446996 DUSP11O75319 330 aaKnown RBP25.23■■□□□ 1.63
APOE-204ENST00000446996 EIF3JO75822 258 aaKnown RBP25.23■■□□□ 1.63
APOE-204ENST00000446996 CTDNEP1O95476 244 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 RARBP10826 455 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 PGM5Q15124 567 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 VSIG10LQ86VR7 867 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 NECAB1Q8N987 351 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 WASF1Q92558 559 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 LLPHQ9BRT6 129 aaKnown RBP25.23■■□□□ 1.63
APOE-204ENST00000446996 Q9Y3F1 56 aa25.23■■□□□ 1.63
APOE-204ENST00000446996 STAM2O75886 525 aa25.22■■□□□ 1.63
APOE-204ENST00000446996 EIF2AK2P19525 551 aaKnown RBP25.22■■□□□ 1.63
APOE-204ENST00000446996 AP3B2Q13367 1082 aa25.22■■□□□ 1.63
APOE-204ENST00000446996 ARRDC4Q8NCT1 418 aa25.22■■□□□ 1.63
APOE-204ENST00000446996 BICD2Q8TD16 824 aa25.22■■□□□ 1.63
APOE-204ENST00000446996 EHMT1Q9H9B1 1298 aa25.22■■□□□ 1.63
APOE-204ENST00000446996 SPDYE3A6NKU9 549 aa25.21■■□□□ 1.63
APOE-204ENST00000446996 CLK2P49760 499 aaKnown RBP25.21■■□□□ 1.63
APOE-204ENST00000446996 GALNT17Q6IS24 598 aa25.21■■□□□ 1.63
APOE-204ENST00000446996 FBXO16Q8IX29 292 aaPredicted RBP25.21■■□□□ 1.63
APOE-204ENST00000446996 NSUN7Q8NE18 718 aaKnown RBP25.21■■□□□ 1.63
APOE-204ENST00000446996 BRCA2P51587 3418 aa25.21■■□□□ 1.63
APOE-204ENST00000446996 NKRFO15226 690 aaKnown RBP eCLIP25.2■■□□□ 1.62
APOE-204ENST00000446996 XBP1P17861 261 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 CCND2P30279 289 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 NKX3-2P78367 333 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 TNFAIP2Q03169 654 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 EEPD1Q7L9B9 569 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 SCFD2Q8WU76 684 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 ORC3Q9UBD5 711 aaPredicted RBP25.2■■□□□ 1.62
APOE-204ENST00000446996 PCDHA6Q9UN73 950 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 PCDHA8Q9Y5H6 950 aa25.2■■□□□ 1.62
APOE-204ENST00000446996 PPFIA3O75145 1194 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 ST3GAL1Q11201 340 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 UBE2SQ16763 222 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 DUSP28Q4G0W2 176 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 PCNX4Q63HM2 1172 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 KCNV1Q6PIU1 500 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 PDGFCQ9NRA1 345 aa25.19■■□□□ 1.62
APOE-204ENST00000446996 GNEQ9Y223 722 aaKnown RBP25.19■■□□□ 1.62
APOE-204ENST00000446996 DDX49Q9Y6V7 483 aaKnown RBP25.19■■□□□ 1.62
APOE-204ENST00000446996 FDPSP14324 419 aaKnown RBP25.18■■□□□ 1.62
APOE-204ENST00000446996 ADCYAP1R1P41586 468 aa25.18■■□□□ 1.62
APOE-204ENST00000446996 TTLL4Q14679 1199 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms