RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	KRT12	Q99456	494 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PACSIN1	Q9BY11	444 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	EPB41L5	Q9HCM4	733 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	IL17RB	Q9NRM6	502 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	ARHGAP20	Q9P2F6	1191 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	MINPP1	Q9UNW1	487 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	KIF11	P52732	1056 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	SNAP25	P60880	206 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PFKFB3	Q16875	520 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PPAN	Q9NQ55	473 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PCDHA6	Q9UN73	950 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PCDHA8	Q9Y5H6	950 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PCDHA13	Q9Y5I0	950 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	SMCO2	A6NFE2	343 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	ECM2	O94769	699 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	TDP2	O95551	362 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	IL6ST	P40189	918 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	KRT83	P78385	493 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	RAPGEF1	Q13905	1077 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	P2RX5	Q93086	422 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	PIGS	Q96S52	555 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	RMND1	Q9NWS8	449 aa		13.9	□□□□□ -0.18
DDR1-238	ENST00000446312	CDHR2	Q9BYE9	1310 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CCDC189	A1A4V9	331 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	KLRF2	D3W0D1	207 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	NDUFAB1	O14561	156 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	SLC16A2	P36021	539 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	SET	Q01105	290 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	RCSD1	Q6JBY9	416 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	TTI2	Q6NXR4	508 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	MTMR8	Q96EF0	704 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	AP1M1	Q9BXS5	423 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CCDC87	Q9NVE4	849 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	AKAP11	Q9UKA4	1901 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	MYO1F	O00160	1098 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	TRAF5	O00463	557 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	KLRC4	O43908	158 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	IRAK1	P51617	712 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	NBPF9	Q3BBW0	867 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CCDC40	Q4G0X9	1142 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	C8orf74	Q6P047	294 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	SPATA4	Q8NEY3	305 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	TBCK	Q8TEA7	893 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CCDC51	Q96ER9	411 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CAPS2	Q9BXY5	557 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	FGFBP2	Q9BYJ0	223 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	SEMA6B	Q9H3T3	888 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	BCAS3	Q9H6U6	928 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	CAPN11	Q9UMQ6	739 aa		13.89	□□□□□ -0.19
DDR1-238	ENST00000446312	TACC1	O75410	805 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	CLSTN1	O94985	981 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	POLR2F	P61218	127 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	NSUN4	Q96CB9	384 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	FAM169A	Q9Y6X4	670 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	PLEKHG2	Q9H7P9	1386 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	DNM2	P50570	870 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	CCDC70	Q6NSX1	233 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	KCNK18	Q7Z418	384 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	PIK3R5	Q8WYR1	880 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	ADAMTS1	Q9UHI8	967 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	PCDHA4	Q9UN74	947 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	C4A	P0C0L4	1744 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	C4B	P0C0L5	1744 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	LOC102724428	A0A0B4J2F2	783 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	GLI1	P08151	1106 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	ACTN1	P12814	892 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	HIBADH	P31937	336 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	COPB2	P35606	906 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	SIK1	P57059	783 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	NAIF1	Q69YI7	327 aa	Predicted RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	CHADL	Q6NUI6	762 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	INTS5	Q6P9B9	1019 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	KIAA0895	Q8NCT3	520 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	KAT2B	Q92831	832 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	OSBPL9	Q96SU4	736 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	IKZF4	Q9H2S9	585 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	CAPN7	Q9Y6W3	813 aa		13.88	□□□□□ -0.19
DDR1-238	ENST00000446312	PNPLA7	Q6ZV29	1317 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	EBAG9	O00559	213 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	USO1	O60763	962 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	TCERG1L	Q5VWI1	586 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	GBP6	Q6ZN66	633 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	XIRP1	Q702N8	1843 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	PRPF6	O94906	941 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	PDE6B	P35913	854 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	SOGA3	Q5TF21	947 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	CREG2	Q8IUH2	290 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	C4orf32	Q8N8J7	132 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	ZNF507	Q8TCN5	953 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	TRIM9	Q9C026	710 aa		13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.87	□□□□□ -0.19
DDR1-238	ENST00000446312	MYMK	A6NI61	221 aa		13.86	□□□□□ -0.19
DDR1-238	ENST00000446312	PSMD14	O00487	310 aa		13.86	□□□□□ -0.19
DDR1-238	ENST00000446312	PPFIA4	O75335	1185 aa		13.86	□□□□□ -0.19

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