RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
SMARCAL1-210ENST00000445153 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 ZNF213O14771 459 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 KDM4AO75164 1064 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 ATP2A2P16615 1042 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 ESR2Q92731 530 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
SMARCAL1-210ENST00000445153 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 RFXAPO00287 272 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ARHGEF15O94989 841 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 IQCF3P0C7M6 154 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ATXN2LQ8WWM7 1075 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ASB2Q96Q27 587 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 OSBPL3Q9H4L5 887 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
SMARCAL1-210ENST00000445153 B4E1Z4 1266 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 GPNMBQ14956 572 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 LY6KQ17RY6 165 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 CHD1LQ86WJ1 897 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 AFG1LQ8WV93 481 aa16.6■□□□□ 0.25
SMARCAL1-210ENST00000445153 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 KPNA6O60684 536 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 CA3P07451 260 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 PFKMP08237 780 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 NUCB1Q02818 461 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 ARHGAP1Q07960 439 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 KAT2BQ92831 832 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 IL25Q9H293 177 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 JMJD4Q9H9V9 463 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 CERS4Q9HA82 394 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 THEGQ9P2T0 379 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
SMARCAL1-210ENST00000445153 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 OPLAHO14841 1288 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 MMP3P08254 477 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 MFAP1P55081 439 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 PTPN11Q06124 597 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 BRDTQ58F21 947 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 STAG2Q8N3U4 1231 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 MPHOSPH6Q99547 160 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 TET1Q8NFU7 2136 aa16.58■□□□□ 0.24
SMARCAL1-210ENST00000445153 MUC3AQ02505 3323 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 ABCB11O95342 1321 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 RAD50Q92878 1312 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 MRPS5P82675 430 aaKnown RBP16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 PTGISQ16647 500 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 KRT40Q6A162 431 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 DHX38Q92620 1227 aaKnown RBP16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 RMDN3Q96TC7 470 aa16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-210ENST00000445153 B4DLN1 442 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 PPP1R11O60927 126 aaPredicted RBP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 GH1P01241 217 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 PDE4AP27815 886 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 RFC2P35250 354 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 TCTN1Q2MV58 587 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 MICALL1Q8N3F8 863 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 ADAMTS19Q8TE59 1207 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 DIAPH3Q9NSV4 1193 aa16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
SMARCAL1-210ENST00000445153 RGS20O76081 388 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms