RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 GOLGA6L1Q8N7Z2 621 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 TIAM2Q8IVF5 1701 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 KIF11P52732 1056 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 CALCRLQ16602 461 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 REXO1Q8N1G1 1221 aaKnown RBP21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 PLCD3Q8N3E9 789 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 IFT81Q8WYA0 676 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 CALML4Q96GE6 196 aa21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 RRP15Q9Y3B9 282 aaKnown RBP21.08■□□□□ 0.97
PAXBP1-204ENST00000443785 PSMD14O00487 310 aa21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 TMED8Q6PL24 325 aaPredicted RBP21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 KCTD1Q719H9 257 aa21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 HNRNPLLQ8WVV9 542 aaKnown RBP21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 CCDC47Q96A33 483 aaKnown RBP21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 NDST4Q9H3R1 872 aa21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 PCDHA13Q9Y5I0 950 aa21.08■□□□□ 0.96
PAXBP1-204ENST00000443785 C6orf229H3BNL8 230 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 POTEB2H3BUK9 544 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 BAG3O95817 575 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 SLC1A4P43007 532 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 SCNN1DP51172 638 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 ZBED6P86452 979 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 GRB10Q13322 594 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 TRADDQ15628 312 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 SV2BQ7L1I2 683 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 BCAS3Q9H6U6 928 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 C6orf50Q9HD87 102 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 PALM3A6NDB9 673 aaPredicted RBP21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 MFSD14BQ5SR56 506 aa21.07■□□□□ 0.96
PAXBP1-204ENST00000443785 TRAF5O00463 557 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 FECHP22830 423 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 TM4SF1P30408 202 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 CACNB3P54284 484 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 CT47A1Q5JQC4 288 aaPredicted RBP21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 LRRC31Q6UY01 552 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 DDX12PQ92771 950 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 CCSER1Q9C0I3 900 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 SBK1Q52WX2 424 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 SH2D3CQ8N5H7 860 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 GOLGA5Q8TBA6 731 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 TTYH3Q9C0H2 523 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 BLOC1S4Q9NUP1 217 aa21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 MKRN1Q9UHC7 482 aaKnown RBP21.06■□□□□ 0.96
PAXBP1-204ENST00000443785 MYH10P35580 1976 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 STAT3P40763 770 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 MAGEA1P43355 309 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 ATP1A2P50993 1020 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 DPP8Q6V1X1 898 aaPredicted RBP21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 BCORQ6W2J9 1755 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 E9PMD0 336 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 GPSM2P81274 684 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 CCDC40Q4G0X9 1142 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 PNMA5Q96PV4 448 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 ANKRD2Q9GZV1 360 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 CENPHQ9H3R5 247 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 XIRP1Q702N8 1843 aaKnown RBP21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 MEIS1O00470 390 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 AFAP1L1Q8TED9 768 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 MTMR8Q96EF0 704 aa21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 DHTKD1Q96HY7 919 aaPredicted RBP21.05■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L15C9J2P7 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L13C9JLJ4 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L11C9JVI0 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L18D6R9N7 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L22D6RA61 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L17D6RBQ6 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L19D6RCP7 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L20D6RJB6 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 RFC4P35249 363 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L24Q0WX57 530 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 SF3A3Q12874 501 aaKnown RBP eCLIP21.04■□□□□ 0.961e-7■■□□□ 11.8
PAXBP1-204ENST00000443785 KCNB1Q14721 858 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 VWA3BQ502W6 1294 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 USP17L6PQ6QN14 398 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 PYM1Q9BRP8 204 aaKnown RBP21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 DOCK2Q92608 1830 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 A0A1W2PQC6 194 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 GNAQP50148 359 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 POLR2FP61218 127 aaKnown RBP21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 LARP4BQ92615 738 aaKnown RBP21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 PACSIN1Q9BY11 444 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 ZMYND12Q9H0C1 365 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 MYO1AQ9UBC5 1043 aa21.04■□□□□ 0.96
PAXBP1-204ENST00000443785 LRP5O75197 1615 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 PCP11498 1178 aaKnown RBP21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 AKR1B1P15121 316 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 VAV2P52735 878 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 GTF2IP78347 998 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 CERS3Q8IU89 383 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 IKZF4Q9H2S9 585 aa21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 RTCBQ9Y3I0 505 aaKnown RBP21.03■□□□□ 0.96
PAXBP1-204ENST00000443785 SAMM50Q9Y512 469 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms