RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HOXC12P31275 282 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 FOXO4P98177 505 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 MCF2L2Q86YR7 1114 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 MARCH10Q8NA82 808 aaPredicted RBP7.27□□□□□ -1.25
VPS50-206ENST00000443443 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 E9PSI1 815 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 TBX1O43435 398 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 GJB6O95452 261 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 FGRP09769 529 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 CTSWP56202 376 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 INF2Q27J81 1249 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 MBLAC2Q68D91 279 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 WWC2Q6AWC2 1192 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 IQCEQ6IPM2 695 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 ZNF227Q86WZ6 799 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 NETO2Q8NC67 525 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 SIT1Q9Y3P8 196 aa7.26□□□□□ -1.25
VPS50-206ENST00000443443 AGRPO00253 132 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 TRIM13O60858 407 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 ZBTB7AO95365 584 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 ASGR2P07307 311 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 ATF2P15336 505 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 HOXA5P20719 270 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 IGFBP6P24592 240 aaPredicted RBP7.25□□□□□ -1.25
VPS50-206ENST00000443443 SLC9A5Q14940 896 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 ANKS3Q6ZW76 656 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 EEPD1Q7L9B9 569 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 TEX2Q8IWB9 1127 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 FRS2Q8WU20 508 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 DPF3Q92784 378 aa7.25□□□□□ -1.25
VPS50-206ENST00000443443 TIMM13Q9Y5L4 95 aaPredicted RBP7.25□□□□□ -1.25
VPS50-206ENST00000443443 C22orf46C9J442 243 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 PMLP29590 882 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 MC3RP41968 323 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 RBM10P98175 930 aaKnown RBP7.24□□□□□ -1.25
VPS50-206ENST00000443443 SF1Q15637 639 aaKnown RBP7.24□□□□□ -1.25
VPS50-206ENST00000443443 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
VPS50-206ENST00000443443 CEP68Q76N32 757 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 ZDHHC14Q8IZN3 488 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 PLEKHO2Q8TD55 490 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
VPS50-206ENST00000443443 DIO2Q92813 273 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 CHAMP1Q96JM3 812 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 CCDC140Q96MF4 163 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 KCNC2Q96PR1 638 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 RNF38Q9H0F5 515 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 PMF1-BGLAPU3KQ54 211 aa7.24□□□□□ -1.25
VPS50-206ENST00000443443 MEFVO15553 781 aaPredicted RBP7.23□□□□□ -1.25
VPS50-206ENST00000443443 MYO1BO43795 1136 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 CPP00450 1065 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 FBLN1P23142 703 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 RPL11P62913 178 aaKnown RBP7.23□□□□□ -1.25
VPS50-206ENST00000443443 PRSS53Q2L4Q9 553 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 LINC01356Q8N9X3 169 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 SLC43A3Q8NBI5 491 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 NPLOC4Q8TAT6 608 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 TRMT2BQ96GJ1 504 aaKnown RBP7.23□□□□□ -1.25
VPS50-206ENST00000443443 AP5M1Q9H0R1 490 aa7.23□□□□□ -1.25
VPS50-206ENST00000443443 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
VPS50-206ENST00000443443 CYP4F3Q08477 520 aa7.22□□□□□ -1.25
VPS50-206ENST00000443443 DCP2Q8IU60 420 aaKnown RBP7.22□□□□□ -1.25
VPS50-206ENST00000443443 FEZF2Q8TBJ5 459 aa7.22□□□□□ -1.25
VPS50-206ENST00000443443 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
VPS50-206ENST00000443443 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
VPS50-206ENST00000443443 RAPGEFL1Q9UHV5 662 aa7.22□□□□□ -1.25
VPS50-206ENST00000443443 FFAR3O14843 346 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 FPR2P25090 351 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 BCL6P41182 706 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 E4F1Q66K89 784 aaPredicted RBP7.21□□□□□ -1.26
VPS50-206ENST00000443443 PPIL6Q8IXY8 311 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 ADGRG2Q8IZP9 1017 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 CELF2-AS1Q8N7Q2 184 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 SYT8Q8NBV8 401 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 EPN3Q9H201 632 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 PCDHA2Q9Y5H9 948 aa7.21□□□□□ -1.26
VPS50-206ENST00000443443 OTOL1A6NHN0 477 aaPredicted RBP7.2□□□□□ -1.26
VPS50-206ENST00000443443 GTF2A2P52657 109 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 KCNAB2Q13303 367 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 B3GNT8Q7Z7M8 397 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 CCDC103Q8IW40 242 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 SP8Q8IXZ3 490 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 SMARCC2Q8TAQ2 1214 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 RELTQ969Z4 430 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 TMEM169Q96HH4 297 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 GMLQ99445 158 aa7.2□□□□□ -1.26
VPS50-206ENST00000443443 A0A1B0GTL3 188 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 ARNTLO00327 626 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 PLA2G1BP04054 148 aaKnown RBP7.19□□□□□ -1.26
VPS50-206ENST00000443443 GRIA2P42262 883 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 KCNC1P48547 511 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
VPS50-206ENST00000443443 DDR2Q16832 855 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 MILR1Q7Z6M3 343 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 TMEM145Q8NBT3 493 aa7.19□□□□□ -1.26
VPS50-206ENST00000443443 KREMEN2Q8NCW0 462 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms