RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 TAL1P17542 331 aaPredicted RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 SPP2Q13103 211 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 RASA3Q14644 834 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 P2RX5Q93086 422 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 USP27XA6NNY8 438 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 POTECB2RU33 542 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 PPP1R2P41236 205 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 RNASE9P60153 205 aaKnown RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 ARHGAP4P98171 946 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 KRT31Q15323 416 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 VSTM4Q8IW00 320 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 OR8K1Q8NGG5 319 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 DDX12PQ92771 950 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 EPB41P11171 864 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 FCER1AP12319 257 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ADAM9Q13443 819 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ELF2Q15723 593 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 DCAF15Q66K64 600 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 TMTC1Q8IUR5 882 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 SOWAHDA6NJG2 315 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 EXOC3O60645 756 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 CDC25BP30305 580 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ECE1P42892 770 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 CGNQ9P2M7 1197 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 ZNF215Q9UL58 517 aaPredicted RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 FRMD4BQ9Y2L6 1034 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 RABGAP1Q9Y3P9 1069 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 hCG_1984214I3L0E3 225 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 CYTH3O43739 400 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 PLA2G4BP0C869 781 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 RAVER2Q9HCJ3 691 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 COL14A1Q05707 1796 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 CLIC2O15247 247 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 DNM2P50570 870 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 STYK1Q6J9G0 422 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 GTPBP4Q9BZE4 634 aaKnown RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
CALD1-210ENST00000443197 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
CALD1-210ENST00000443197 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 PLSCR1O15162 318 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 RHBDL3P58872 404 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 PTPROQ16827 1216 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
CALD1-210ENST00000443197 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 GADL1Q6ZQY3 521 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 CSADQ9Y600 493 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ETF1P62495 437 aaKnown RBP11.74□□□□□ -0.53
CALD1-210ENST00000443197 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
CALD1-210ENST00000443197 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 SH2D3AQ9BRG2 576 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ZHX2Q9Y6X8 837 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
CALD1-210ENST00000443197 TACC1O75410 805 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
CALD1-210ENST00000443197 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 ZMYND12Q9H0C1 365 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 FBXO28Q9NVF7 368 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
CALD1-210ENST00000443197 C5P01031 1676 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 TRIM14Q14142 442 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 GPR162Q16538 588 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 ODR4Q5SWX8 454 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 TAF3Q5VWG9 929 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 NT5C2P49902 561 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 ERCC6LQ2NKX8 1250 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms