RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 FTSJ3Q8IY81 847 aaKnown RBP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 ANKRD35Q8N283 1001 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 CLASRPQ8N2M8 674 aaKnown RBP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-215ENST00000441986 FBXO40Q9UH90 709 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 RAPGEFL1Q9UHV5 662 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 TNNQ9UQP3 1299 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 FRMPD3Q5JV73 1810 aa7.38□□□□□ -1.23
HDAC9-215ENST00000441986 FOCADQ5VW36 1801 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 ZNF236Q9UL36 1845 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 F5H6K3 240 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 ATP2A1O14983 1001 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 PRKAB2O43741 272 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 ZEB2O60315 1214 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 S1PR4O95977 384 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 CD4P01730 458 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 CYP2C18P33260 490 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 NKX3-2P78367 333 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 KLRC3Q07444 240 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 FAM83BQ5T0W9 1011 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 C16orf86Q6ZW13 317 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 NOL8Q76FK4 1167 aaKnown RBP7.37□□□□□ -1.23
HDAC9-215ENST00000441986 OTOP2Q7RTS6 562 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 FAM126BQ8IXS8 530 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 CPXCR1Q8N123 301 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 LCORLQ8N3X6 602 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 REPS2Q8NFH8 660 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 LENG1Q96BZ8 264 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-215ENST00000441986 DNAJC2Q99543 621 aaKnown RBP7.37□□□□□ -1.23
HDAC9-215ENST00000441986 SLF1Q9BQI6 1058 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 HIPK3Q9H422 1215 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 RIPK3Q9Y572 518 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 SLC4A7Q9Y6M7 1214 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 REV3LO60673 3130 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 BDP1A6H8Y1 2624 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 MYH1P12882 1939 aa7.37□□□□□ -1.23
HDAC9-215ENST00000441986 MBD4O95243 580 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 OAZ1P54368 228 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 TNFAIP2Q03169 654 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ITGA7Q13683 1181 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ZSCAN25Q6NSZ9 544 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CTR9Q6PD62 1173 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CLEC10AQ8IUN9 316 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ITPRIPQ8IWB1 547 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-215ENST00000441986 SLC43A3Q8NBI5 491 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CHST13Q8NET6 341 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 RHPN1Q8TCX5 695 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ARHGAP9Q9BRR9 750 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 AP5M1Q9H0R1 490 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 UPF3AQ9H1J1 476 aaKnown RBP7.36□□□□□ -1.23
HDAC9-215ENST00000441986 NKX2-4Q9H2Z4 354 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 IL1RAPL2Q9NP60 686 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 NYAP2Q9P242 653 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CLIP2Q9UDT6 1046 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 COG5Q9UP83 839 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 EXOC6BQ9Y2D4 811 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 PCDHA11Q9Y5I1 949 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 SLC4A4Q9Y6R1 1079 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CHD7Q9P2D1 2997 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 TRANK1O15050 2925 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
HDAC9-215ENST00000441986 CDK5RAP2Q96SN8 1893 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 CYP2D7A0A087X1C5 515 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 ASB14A6NK59 587 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 ERC2O15083 957 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 SUPT20HL2P0C7V6 817 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-215ENST00000441986 ADD2P35612 726 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 CCL23P55773 120 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 PDE4CQ08493 712 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 UBE3CQ15386 1083 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 TMEM67Q5HYA8 995 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 IQSEC1Q6DN90 963 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 CEP85Q6P2H3 762 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 ARMCX2Q7L311 632 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 ADAM32Q8TC27 787 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 MKL1Q969V6 931 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 KIFC2Q96AC6 838 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 KIF1BPQ96EK5 621 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 SLC38A10Q9HBR0 1119 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 RAVER2Q9HCJ3 691 aaKnown RBP7.35□□□□□ -1.23
HDAC9-215ENST00000441986 PAG1Q9NWQ8 432 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 HCSTQ9UBK5 93 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 FEM1BQ9UK73 627 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 YBX2Q9Y2T7 364 aaKnown RBP7.35□□□□□ -1.23
HDAC9-215ENST00000441986 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
HDAC9-215ENST00000441986 Q9Y3F1 56 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 HCN4Q9Y3Q4 1203 aa7.35□□□□□ -1.23
HDAC9-215ENST00000441986 SMCHD1A6NHR9 2005 aa7.34□□□□□ -1.23
HDAC9-215ENST00000441986 KIF28PB7ZC32 967 aa7.34□□□□□ -1.23
HDAC9-215ENST00000441986 PIK3CDO00329 1044 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms