RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 CNTNAP5Q8WYK1 1306 aa18.41■□□□□ 0.54
TRAPPC12-209ENST00000441099 H0YGN5 161 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 EIF2AK2P19525 551 aaKnown RBP18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 METAP2P50579 478 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 ATN1P54259 1190 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 PPP2R5BQ15173 497 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 KCNA10Q16322 511 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 ARHGEF16Q5VV41 709 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 Q9Y3F1 56 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 NR2E3Q9Y5X4 410 aa18.4■□□□□ 0.54
TRAPPC12-209ENST00000441099 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 NR3C2P08235 984 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 C6orf222P0C671 652 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 ANAPC15P60006 121 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 DUSP28Q4G0W2 176 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 SLC39A5Q6ZMH5 540 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 NOL8Q76FK4 1167 aaKnown RBP18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 TLK2Q86UE8 772 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 IL17RAQ96F46 866 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 PDCD2LQ9BRP1 358 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 WDR11Q9BZH6 1224 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 V9GY48 417 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 NID2Q14112 1375 aa18.39■□□□□ 0.53
TRAPPC12-209ENST00000441099 MEIS2O14770 477 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 DYNC1LI2O43237 492 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 ACLYP53396 1101 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 SNX17Q15036 470 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 STXBP2Q15833 593 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 C7orf61Q8IZ16 206 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 SCFD2Q8WU76 684 aa18.38■□□□□ 0.53
TRAPPC12-209ENST00000441099 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 A0A1W2PQ45 241 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 A0A1W2PQY0 241 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 MOXD2PA6NHM9 499 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 PIK3CDO00329 1044 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 BEX3Q00994 111 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 C1orf53Q5VUE5 145 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 USP17L6PQ6QN14 398 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 FCHSD1Q86WN1 690 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
TRAPPC12-209ENST00000441099 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 ARIH2O95376 493 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 RTP1P59025 263 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 PGM5Q15124 567 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 CCDC62Q6P9F0 684 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 VSIG10LQ86VR7 867 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 PCSK9Q8NBP7 692 aaKnown RBP18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 IL31RAQ8NI17 732 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 PSTPIP2Q9H939 334 aa18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 ZNFX1Q9P2E3 1918 aaKnown RBP18.36■□□□□ 0.53
TRAPPC12-209ENST00000441099 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 FRMPD4Q14CM0 1322 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 ASGR1P07306 291 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 TXNP10599 105 aaKnown RBP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 NTRK3Q16288 839 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 FSCN1Q16658 493 aaKnown RBP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 TYW1BQ6NUM6 668 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 COPS5Q92905 334 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 CUL5Q93034 780 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 ALDH8A1Q9H2A2 487 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
TRAPPC12-209ENST00000441099 STXBP3O00186 592 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 RGS20O76081 388 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 MYCLP12524 364 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 CCT2P78371 535 aaKnown RBP18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 NCOA5Q9HCD5 579 aaKnown RBP18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 PLXNA1Q9UIW2 1896 aa18.34■□□□□ 0.53
TRAPPC12-209ENST00000441099 ELP1O95163 1332 aa18.33■□□□□ 0.53
TRAPPC12-209ENST00000441099 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 PRPF3O43395 683 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 IFNAR1P17181 557 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 CCND2P30279 289 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 PKN1Q16512 942 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 TRIM60Q495X7 471 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 OR6J1Q8NGC5 347 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 STARD7Q9NQZ5 370 aa18.33■□□□□ 0.52
TRAPPC12-209ENST00000441099 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms