RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 EDNRBP24530 442 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 FLT3LGP49771 235 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 FCGRTP55899 365 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 PRKCZQ05513 592 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
PLOD3-205ENST00000440925 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 PDCD2LQ9BRP1 358 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 ANO3Q9BYT9 981 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 PXMP2Q9NR77 195 aa17.04■□□□□ 0.32
PLOD3-205ENST00000440925 MGAMO43451 1857 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 PFASO15067 1338 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 SNAI1O95863 264 aaPredicted RBP17.03■□□□□ 0.32
PLOD3-205ENST00000440925 CYP2B6P20813 491 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 TRIM29Q14134 588 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 PGM5Q15124 567 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 TEX2Q8IWB9 1127 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 MAML3Q96JK9 1138 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 BEGAINQ9BUH8 593 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 KATNBL1Q9H079 304 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 SRRDQ9UH36 339 aa17.03■□□□□ 0.32
PLOD3-205ENST00000440925 H3BQV1 296 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 FOSP01100 380 aaPredicted RBP17.02■□□□□ 0.32
PLOD3-205ENST00000440925 NR3C2P08235 984 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 CYP3A4P08684 503 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
PLOD3-205ENST00000440925 SREBF1P36956 1147 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 ALDH5A1P51649 535 aaPredicted RBP17.02■□□□□ 0.32
PLOD3-205ENST00000440925 LBX1P52954 281 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 INF2Q27J81 1249 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 TMEM63BQ5T3F8 832 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 MAMDC4Q6UXC1 1216 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.32
PLOD3-205ENST00000440925 BICD2Q8TD16 824 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 TBCKQ8TEA7 893 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 NUDT12Q9BQG2 462 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
PLOD3-205ENST00000440925 KIF3AQ9Y496 699 aa17.02■□□□□ 0.32
PLOD3-205ENST00000440925 F13A1P00488 732 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 TRIM32Q13049 653 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 AP3B2Q13367 1082 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 NBR1Q14596 966 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 MCTP1Q6DN14 999 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
PLOD3-205ENST00000440925 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 MBOAT7Q96N66 472 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 BCAS3Q9H6U6 928 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
PLOD3-205ENST00000440925 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 FAM86B1E9PN63 330 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 FAM86B2P0C5J1 330 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 XRCC5P13010 732 aaKnown RBP17■□□□□ 0.31
PLOD3-205ENST00000440925 ITGB5P18084 799 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 CYP3A7P24462 503 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 CIITAP33076 1130 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 ARHGAP4P98171 946 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 PRAMEF19Q5SWL8 479 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 KRT25Q7Z3Z0 450 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
PLOD3-205ENST00000440925 LENG9Q96B70 501 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 UBIAD1Q9Y5Z9 338 aa17■□□□□ 0.31
PLOD3-205ENST00000440925 ZNF236Q9UL36 1845 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 IGLV3-22A0A075B6J6 115 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 RGS2P41220 211 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 USP11P51784 963 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 IRF5Q13568 498 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 KIF22Q14807 665 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.31
PLOD3-205ENST00000440925 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
PLOD3-205ENST00000440925 ARHGEF16Q5VV41 709 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 TAPT1Q6NXT6 567 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 TRPV1Q8NER1 839 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 TRIB2Q92519 343 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 IWS1Q96ST2 819 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 TINF2Q9BSI4 451 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
PLOD3-205ENST00000440925 PCDHB6Q9Y5E3 794 aa16.99■□□□□ 0.31
PLOD3-205ENST00000440925 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 MEIS1O00470 390 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 TDP2O95551 362 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
PLOD3-205ENST00000440925 PTGS1P23219 599 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
PLOD3-205ENST00000440925 MYSM1Q5VVJ2 828 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 PCNX4Q63HM2 1172 aa16.98■□□□□ 0.31
PLOD3-205ENST00000440925 PDGFCQ9NRA1 345 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms