RNA–Protein interactions for RNA: ENST00000440838.5

PSMD1-205, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 761 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-205ENST00000440838 TIMP1P01033 207 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 NEFLP07196 543 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 MYL3P08590 195 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 GNAQP50148 359 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 FPGSQ05932 587 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
PSMD1-205ENST00000440838 MTMR8Q96EF0 704 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 PIGSQ96S52 555 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 TAF6LQ9Y6J9 622 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 LAMA3Q16787 3333 aa12.95□□□□□ -0.34
PSMD1-205ENST00000440838 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
PSMD1-205ENST00000440838 DDAH1O94760 285 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 CALM1P0DP23 149 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 CALM2P0DP24 149 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 CALM3P0DP25 149 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 TROAPQ12815 778 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 SHHQ15465 462 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 ZNF654Q8IZM8 581 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 RRP36Q96EU6 259 aaKnown RBP12.94□□□□□ -0.34
PSMD1-205ENST00000440838 MAP3K14Q99558 947 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 LY9Q9HBG7 655 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
PSMD1-205ENST00000440838 SZT2Q5T011 3432 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 MYH6P13533 1939 aa12.94□□□□□ -0.34
PSMD1-205ENST00000440838 CDC45O75419 566 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
PSMD1-205ENST00000440838 NR3C2P08235 984 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 EIF2AK2P19525 551 aaKnown RBP12.93□□□□□ -0.34
PSMD1-205ENST00000440838 PTGS1P23219 599 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 ITGB8P26012 769 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 HSD17B4P51659 736 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 ANTXR2P58335 489 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.349e-6■■■■□ 22.2
PSMD1-205ENST00000440838 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 MFSD5Q6N075 450 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 MTG1Q9BT17 334 aaPredicted RBP12.93□□□□□ -0.34
PSMD1-205ENST00000440838 PXMP2Q9NR77 195 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 COL20A1Q9P218 1284 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 SLC12A7Q9Y666 1083 aa12.93□□□□□ -0.34
PSMD1-205ENST00000440838 GH1P01241 217 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 MYCLP12524 364 aaPredicted RBP12.92□□□□□ -0.34
PSMD1-205ENST00000440838 SMARCA1P28370 1054 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 LIFRP42702 1097 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 PSMC6P62333 389 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
PSMD1-205ENST00000440838 C9orf50Q5SZB4 431 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 CUL5Q93034 780 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
PSMD1-205ENST00000440838 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 MYL10Q9BUA6 226 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 PPP1R12CQ9BZL4 782 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
PSMD1-205ENST00000440838 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
PSMD1-205ENST00000440838 SH2B2O14492 632 aaPredicted RBP12.91□□□□□ -0.34
PSMD1-205ENST00000440838 CYTH3O43739 400 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 PPP1R11O60927 126 aaPredicted RBP12.91□□□□□ -0.34
PSMD1-205ENST00000440838 CD4P01730 458 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
PSMD1-205ENST00000440838 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 KRT32Q14532 448 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 COPS5Q92905 334 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 HIPK3Q9H422 1215 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
PSMD1-205ENST00000440838 LCTP09848 1927 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
PSMD1-205ENST00000440838 A6NJR5 290 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 OPLAHO14841 1288 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 B4GALT4O60513 344 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 ARIH2O95376 493 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
PSMD1-205ENST00000440838 CCND2P30279 289 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 GHRHRQ02643 423 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 ZNF697Q5TEC3 545 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
PSMD1-205ENST00000440838 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 PDCD2LQ9BRP1 358 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 TRPV6Q9H1D0 765 aa12.9□□□□□ -0.34
PSMD1-205ENST00000440838 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
PSMD1-205ENST00000440838 GRIN2DO15399 1336 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms