RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TAPT1Q6NXT6 567 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
CPSF4-205ENST00000440514 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
CPSF4-205ENST00000440514 ALDH8A1Q9H2A2 487 aaPredicted RBP20.79■□□□□ 0.92
CPSF4-205ENST00000440514 MAP3K20Q9NYL2 800 aaKnown RBP20.79■□□□□ 0.92
CPSF4-205ENST00000440514 STXBP3O00186 592 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 NAPAP54920 295 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 UBE2SQ16763 222 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 USP17L6PQ6QN14 398 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 SAMD3Q8N6K7 520 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 IL31RAQ8NI17 732 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 ALPK3Q96L96 1907 aa20.78■□□□□ 0.92
CPSF4-205ENST00000440514 ADAMTS4O75173 837 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 LARGE1O95461 756 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 IFNAR1P17181 557 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 IRX5P78411 483 aaPredicted RBP20.77■□□□□ 0.92
CPSF4-205ENST00000440514 TNFAIP2Q03169 654 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 LRRC41Q15345 812 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 NECAB2Q7Z6G3 386 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 SMARCC2Q8TAQ2 1214 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 KIF2CQ99661 725 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 PDCD2LQ9BRP1 358 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 SLC26A6Q9BXS9 759 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 C11orf49Q9H6J7 331 aa20.77■□□□□ 0.92
CPSF4-205ENST00000440514 MYADML2A6NDP7 307 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 B4DLN1 442 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 DNM1LO00429 736 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 MEIS2O14770 477 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 PRPF3O43395 683 aaKnown RBP20.76■□□□□ 0.91
CPSF4-205ENST00000440514 DUSP11O75319 330 aaKnown RBP20.76■□□□□ 0.91
CPSF4-205ENST00000440514 COL6A1P12109 1028 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 SCG2P13521 617 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 SMPD1P17405 629 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 RBM25P49756 843 aaKnown RBP20.76■□□□□ 0.91
CPSF4-205ENST00000440514 MRPL12P52815 198 aaKnown RBP20.76■□□□□ 0.91
CPSF4-205ENST00000440514 SCRN1Q12765 414 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 PKN1Q16512 942 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 PFKFB3Q16875 520 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-205ENST00000440514 PPP1R18Q6NYC8 613 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 ARRDC4Q8NCT1 418 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 CUL5Q93034 780 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 IWS1Q96ST2 819 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 KIAA1217Q5T5P2 1943 aa20.76■□□□□ 0.91
CPSF4-205ENST00000440514 MKI67P46013 3256 aaKnown RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 KBTBD13C9JR72 458 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 hCG_1984214I3L0E3 225 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 NR3C2P08235 984 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 MYCLP12524 364 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 PGM5Q15124 567 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 STXBP2Q15833 593 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 ZNF713Q8N859 430 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 RNF26Q9BY78 433 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 BARHL2Q9NY43 387 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
CPSF4-205ENST00000440514 FRMPD4Q14CM0 1322 aa20.75■□□□□ 0.91
CPSF4-205ENST00000440514 RBM47A0AV96 593 aaKnown RBP20.74■□□□□ 0.91
CPSF4-205ENST00000440514 CPLX1O14810 134 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 PFKFB2O60825 505 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 DTNBO60941 627 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 ADCY7P51828 1080 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 AKAP17AQ02040 695 aaKnown RBP20.74■□□□□ 0.91
CPSF4-205ENST00000440514 RNF180Q86T96 592 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 TLK2Q86UE8 772 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 WDR11Q9BZH6 1224 aa20.74■□□□□ 0.91
CPSF4-205ENST00000440514 UPF3AQ9H1J1 476 aaKnown RBP20.74■□□□□ 0.91
CPSF4-205ENST00000440514 UPF2Q9HAU5 1272 aaKnown RBP20.74■□□□□ 0.91
CPSF4-205ENST00000440514 RBM27Q9P2N5 1060 aaKnown RBP20.74■□□□□ 0.91
CPSF4-205ENST00000440514 ARIH2O95376 493 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
CPSF4-205ENST00000440514 GJA9P57773 515 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 ME3Q16798 604 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 IQSEC1Q6DN90 963 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 SEPT14Q6ZU15 432 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 SCFD2Q8WU76 684 aa20.73■□□□□ 0.91
CPSF4-205ENST00000440514 TNRC18O15417 2968 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-205ENST00000440514 CCND2P30279 289 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 SSRP1Q08945 709 aaKnown RBP20.72■□□□□ 0.91
CPSF4-205ENST00000440514 DUSP28Q4G0W2 176 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 TRIM22Q8IYM9 498 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 NECAB1Q8N987 351 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 COPS5Q92905 334 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 HTATIP2Q9BUP3 242 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-205ENST00000440514 RIC8AQ9NPQ8 531 aa20.72■□□□□ 0.91
CPSF4-205ENST00000440514 SMCO2A6NFE2 343 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 CTAGE5O15320 804 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 CST5P28325 142 aaPredicted RBP20.71■□□□□ 0.91
CPSF4-205ENST00000440514 BEX3Q00994 111 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 CPLX2Q6PUV4 134 aaKnown RBP20.71■□□□□ 0.91
CPSF4-205ENST00000440514 KLHDC9Q8NEP7 349 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 IL27Q8NEV9 243 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 FERMT2Q96AC1 680 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 PGBD1Q96JS3 809 aa20.71■□□□□ 0.91
CPSF4-205ENST00000440514 SPC25Q9HBM1 224 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms