RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 RILPL1Q5EBL4 403 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 USP28Q96RU2 1077 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 RMDN3Q96TC7 470 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 PXMP2Q9NR77 195 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 PCDHB6Q9Y5E3 794 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 ATP6V1DQ9Y5K8 247 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
UBR3-205ENST00000439681 CYP3A7-CYP3A51PA0A087WV96 503 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 SLC15A5A6NIM6 579 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 BAG4O95429 457 aaKnown RBP8.53□□□□□ -1.04
UBR3-205ENST00000439681 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 CYP3A7P24462 503 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 ADORA2AP29274 412 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 USP11P51784 963 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 UBXN2AP68543 259 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 GRB14Q14449 540 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 ZNF174Q15697 407 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 ZNF792Q3KQV3 632 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 TTC38Q5R3I4 469 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 MORN1Q5T089 497 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 ATL3Q6DD88 541 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 NEK8Q86SG6 692 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
UBR3-205ENST00000439681 C4orf32Q8N8J7 132 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 USP6NLQ92738 828 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 MBOAT7Q96N66 472 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 PDCD2LQ9BRP1 358 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
UBR3-205ENST00000439681 SAGE1Q9NXZ1 904 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 RTEL1Q9NZ71 1219 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 GJD2Q9UKL4 321 aa8.53□□□□□ -1.04
UBR3-205ENST00000439681 ECM2O94769 699 aaPredicted RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 EIF2AK2P19525 551 aaKnown RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 CIITAP33076 1130 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 LACTBP83111 547 aaPredicted RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 PLCB2Q00722 1185 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 MAP2K1Q02750 393 aaPredicted RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 PGM5Q15124 567 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 PTPAQ15257 358 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 LETM2Q2VYF4 491 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 ARHGEF16Q5VV41 709 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 ANO1Q5XXA6 986 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 VSIG10LQ86VR7 867 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 DNERQ8NFT8 737 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 NSUN6Q8TEA1 469 aaKnown RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 TRIM47Q96LD4 638 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 ARHGAP39Q9C0H5 1083 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 WBP1LQ9NX94 342 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 NOL7Q9UMY1 257 aaKnown RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 CNPY2Q9Y2B0 182 aa8.52□□□□□ -1.04
UBR3-205ENST00000439681 DDX49Q9Y6V7 483 aaKnown RBP8.52□□□□□ -1.04
UBR3-205ENST00000439681 SMCHD1A6NHR9 2005 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 FAM86B1E9PN63 330 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 GPR25O00155 361 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 TDP2O95551 362 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 NR3C2P08235 984 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 FAM86B2P0C5J1 330 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 EDNRBP24530 442 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 PSMC4P43686 418 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.05
UBR3-205ENST00000439681 MRPS9P82933 396 aaKnown RBP8.52□□□□□ -1.05
UBR3-205ENST00000439681 SP3Q02447 781 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 CEBPZQ03701 1054 aaKnown RBP8.52□□□□□ -1.05
UBR3-205ENST00000439681 SF3A1Q15459 793 aaKnown RBP8.52□□□□□ -1.05
UBR3-205ENST00000439681 PCNX4Q63HM2 1172 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 LINC00301Q8NCQ3 95 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 CYP2W1Q8TAV3 490 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 ZFP91Q96JP5 570 aaPredicted RBP8.52□□□□□ -1.05
UBR3-205ENST00000439681 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 RCOR1Q9UKL0 485 aa8.52□□□□□ -1.05
UBR3-205ENST00000439681 THSD7BQ9C0I4 1608 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 IGLV3-22A0A075B6J6 115 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 CCNT1O60563 726 aaKnown RBP8.51□□□□□ -1.05
UBR3-205ENST00000439681 ITGB5P18084 799 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 MCM7P33993 719 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
UBR3-205ENST00000439681 SLC39A14Q15043 492 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 XRRA1Q6P2D8 792 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 MOXD1Q6UVY6 613 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 NPLOC4Q8TAT6 608 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 MORC4Q8TE76 937 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 LENG9Q96B70 501 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 IWS1Q96ST2 819 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 TMEM60Q9H2L4 133 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 EHMT1Q9H9B1 1298 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 CFAP45Q9UL16 551 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 UBIAD1Q9Y5Z9 338 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 MRVI1Q9Y6F6 885 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 COL11A1P12107 1806 aaPredicted RBP8.51□□□□□ -1.05
UBR3-205ENST00000439681 MEIS1O00470 390 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 TNPO2O14787 897 aaKnown RBP8.51□□□□□ -1.05
UBR3-205ENST00000439681 SLC37A4O43826 429 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 RGS20O76081 388 aa8.51□□□□□ -1.05
UBR3-205ENST00000439681 HOXC6P09630 235 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms