RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 TRAF1Q13077 416 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 RTN1Q16799 776 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
LMO3-207ENST00000439600 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 PRRT2Q7Z6L0 340 aaPredicted RBP12.58□□□□□ -0.4
LMO3-207ENST00000439600 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 CCDC116Q8IYX3 515 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
LMO3-207ENST00000439600 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
LMO3-207ENST00000439600 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
LMO3-207ENST00000439600 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 NDUFB10O96000 172 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 COL9A3Q14050 684 aaPredicted RBP12.57□□□□□ -0.4
LMO3-207ENST00000439600 GRM4Q14833 912 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 CCDC96Q2M329 555 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 MRGPRX2Q96LB1 330 aa12.57□□□□□ -0.4
LMO3-207ENST00000439600 LLPHQ9BRT6 129 aaKnown RBP12.57□□□□□ -0.4
LMO3-207ENST00000439600 RASSF10A6NK89 507 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 HMGCS2P54868 508 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 AKAP17AQ02040 695 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 SREBF2Q12772 1141 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 IKQ13123 557 aaPredicted RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 NOGQ13253 232 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 COG2Q14746 738 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 ME3Q16798 604 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 NOL8Q76FK4 1167 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 CCDC84Q86UT8 332 aaPredicted RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 C1orf216Q8TAB5 229 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 SLC45A1Q9Y2W3 748 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
LMO3-207ENST00000439600 BAZ2AQ9UIF9 1905 aaKnown RBP12.56□□□□□ -0.4
LMO3-207ENST00000439600 TMEM232C9JQI7 657 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 SCTRP47872 440 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 STAT2P52630 851 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 STK3Q13188 491 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 ANKRD23Q86SG2 305 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 SPICE1Q8N0Z3 855 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 GTF3C2Q8WUA4 911 aaPredicted RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 GTF3C6Q969F1 213 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 INTS4Q96HW7 963 aaKnown RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 AGTPBP1Q9UPW5 1226 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
LMO3-207ENST00000439600 LAMB1P07942 1786 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
LMO3-207ENST00000439600 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 CCL15-CCL14A0A0B4J2E2 113 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 IFNAR1P17181 557 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 VCAM1P19320 739 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 ADD1P35611 737 aaKnown RBP12.54□□□□□ -0.4
LMO3-207ENST00000439600 MAP2K2P36507 400 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 HMGN5P82970 282 aaKnown RBP12.54□□□□□ -0.4
LMO3-207ENST00000439600 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
LMO3-207ENST00000439600 SCRN1Q12765 414 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 CCL15Q16663 113 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 CATSPERGQ6ZRH7 1159 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 WASF1Q92558 559 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
LMO3-207ENST00000439600 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
LMO3-207ENST00000439600 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 NID2Q14112 1375 aa12.54□□□□□ -0.4
LMO3-207ENST00000439600 ZBED4O75132 1171 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 TM4SF4P48230 202 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
LMO3-207ENST00000439600 CUL4AQ13619 759 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
LMO3-207ENST00000439600 PHLDB3Q6NSJ2 640 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 TMTC3Q6ZXV5 915 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
LMO3-207ENST00000439600 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms