RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TNKSO95271 1327 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 PTPDC1A2A3K4 754 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 CD4P01730 458 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 EDNRBP24530 442 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
IRF1-204ENST00000439555 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
IRF1-204ENST00000439555 TRDNQ13061 729 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 DUSP28Q4G0W2 176 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
IRF1-204ENST00000439555 PDGFCQ9NRA1 345 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 COG5Q9UP83 839 aa13.4□□□□□ -0.26
IRF1-204ENST00000439555 PRRC2BQ5JSZ5 2229 aaKnown RBP13.4□□□□□ -0.26
IRF1-204ENST00000439555 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
IRF1-204ENST00000439555 DYNC1LI2O43237 492 aaPredicted RBP13.39□□□□□ -0.27
IRF1-204ENST00000439555 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
IRF1-204ENST00000439555 GOLGA8HP0CJ92 632 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 ACRP10323 421 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 SEC23AQ15436 765 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 TMEM31Q5JXX7 168 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
IRF1-204ENST00000439555 SLC30A10Q6XR72 485 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 FBXO16Q8IX29 292 aaPredicted RBP13.39□□□□□ -0.27
IRF1-204ENST00000439555 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 UBA5Q9GZZ9 404 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 NKX2-4Q9H2Z4 354 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 PCDHA11Q9Y5I1 949 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 ABCB11O95342 1321 aa13.39□□□□□ -0.27
IRF1-204ENST00000439555 SGSM2O43147 1006 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 CALML3P27482 149 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 BEX3Q00994 111 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 PDE4DQ08499 809 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 CDC37Q16543 378 aaPredicted RBP13.38□□□□□ -0.27
IRF1-204ENST00000439555 CXCL17Q6UXB2 119 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
IRF1-204ENST00000439555 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 NECAB3Q96P71 396 aaPredicted RBP13.38□□□□□ -0.27
IRF1-204ENST00000439555 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
IRF1-204ENST00000439555 YBX2Q9Y2T7 364 aaKnown RBP13.38□□□□□ -0.27
IRF1-204ENST00000439555 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
IRF1-204ENST00000439555 TLL1O43897 1013 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 KPNA6O60684 536 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 CYP21A2P08686 494 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 CPT1AP50416 773 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 TRAF1Q13077 416 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 FBXO11Q86XK2 927 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
IRF1-204ENST00000439555 MAP3K20Q9NYL2 800 aaKnown RBP13.37□□□□□ -0.27
IRF1-204ENST00000439555 DDX49Q9Y6V7 483 aaKnown RBP13.37□□□□□ -0.27
IRF1-204ENST00000439555 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
IRF1-204ENST00000439555 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
IRF1-204ENST00000439555 GHRHRQ02643 423 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 TFF2Q03403 129 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 PTH1RQ03431 593 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
IRF1-204ENST00000439555 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 USH1GQ495M9 461 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
IRF1-204ENST00000439555 PPP2R2DQ66LE6 453 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 CYB5R4Q7L1T6 521 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 NSUN6Q8TEA1 469 aaKnown RBP13.36□□□□□ -0.27
IRF1-204ENST00000439555 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 MTCH2Q9Y6C9 303 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
IRF1-204ENST00000439555 ERICH2A1L162 156 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
IRF1-204ENST00000439555 CYP2C18P33260 490 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 KCNQ1P51787 676 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 RALYLQ86SE5 291 aaKnown RBP13.35□□□□□ -0.27
IRF1-204ENST00000439555 NCOA7Q8NI08 942 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 SYTL5Q8TDW5 730 aaPredicted RBP13.35□□□□□ -0.27
IRF1-204ENST00000439555 MTA3Q9BTC8 594 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 PIEZO1Q92508 2521 aa13.35□□□□□ -0.27
IRF1-204ENST00000439555 A6NJR5 290 aa13.34□□□□□ -0.27
IRF1-204ENST00000439555 E7EWF7 191 aa13.34□□□□□ -0.27
IRF1-204ENST00000439555 PI4K2BG5E9Z4 385 aa13.34□□□□□ -0.27
IRF1-204ENST00000439555 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
IRF1-204ENST00000439555 ZBTB5O15062 677 aa13.34□□□□□ -0.27
IRF1-204ENST00000439555 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
IRF1-204ENST00000439555 PFKMP08237 780 aa13.34□□□□□ -0.27
IRF1-204ENST00000439555 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms