RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 SPATA4Q8NEY3 305 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 FAM107BQ9H098 131 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 IL17RBQ9NRM6 502 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PCDHA13Q9Y5I0 950 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PLEKP08567 350 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 GNAQP50148 359 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 IRAK1P51617 712 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 GBP6Q6ZN66 633 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 LRRC1Q9BTT6 524 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 ARHGAP20Q9P2F6 1191 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 MINPP1Q9UNW1 487 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 STXBP3O00186 592 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SLC35G1Q2M3R5 365 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 HDAC7Q8WUI4 952 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 DMGDHQ9UI17 866 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 GOLGA8KD6RF30 607 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 TCP1P17987 556 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 TNFRSF8P28908 595 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 EZH2Q15910 746 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SND1Q7KZF4 910 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 OSBPL9Q96SU4 736 aa16.96■□□□□ 0.31
CDC42EP4-202ENST00000439510 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.36e-9■■□□□ 13.9
CDC42EP4-202ENST00000439510 EPB41P11171 864 aaKnown RBP16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 FCER1AP12319 257 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 ASIC1P78348 528 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 KIF11P52732 1056 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 EPHB4P54760 987 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 EMBQ6PCB8 327 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 KIAA0895Q8NCT3 520 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 HYOU1Q9Y4L1 999 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 ABCB11O95342 1321 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 CYTH3O43739 400 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 OR52Z1P0C646 297 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 TFAP4Q01664 338 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 RRP36Q96EU6 259 aaKnown RBP16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 SEMA6BQ9H3T3 888 aa16.95■□□□□ 0.3
CDC42EP4-202ENST00000439510 GRIN2DO15399 1336 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 ANKRD65E5RJM6 399 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 MOCS3O95396 460 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 C3orf67Q6ZVT6 689 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 TADA2BQ86TJ2 420 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCDC24Q8N4L8 307 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 CAVIN3Q969G5 261 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 ALS2CR12Q96Q35 445 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 CAPS2Q9BXY5 557 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 PJA2O43164 708 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 OPA1O60313 960 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 AMPD3Q01432 767 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 ALS2CLQ60I27 953 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 HEATR3Q7Z4Q2 680 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 STIM2Q9P246 746 aa16.94■□□□□ 0.3
CDC42EP4-202ENST00000439510 EPHB6O15197 1021 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 EIF3HO15372 352 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 ICE2Q659A1 982 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 NDST4Q9H3R1 872 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 ROBO3Q96MS0 1386 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCDC155Q8N6L0 562 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 ZMYND12Q9H0C1 365 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 MCM9Q9NXL9 1143 aa16.93■□□□□ 0.3
CDC42EP4-202ENST00000439510 ZPR1O75312 459 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 KLRK1P26718 216 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 PRDX5P30044 214 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 C12orf60Q5U649 245 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 PALM3A6NDB9 673 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCT5P48643 541 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 SKOR1P84550 965 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms