RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TCEANC2Q96MN5 208 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-216ENST00000439475 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 ZMYND8Q9ULU4 1186 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-216ENST00000439475 HTTP42858 3142 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 NR3C2P08235 984 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 EIF2AK2P19525 551 aaKnown RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 CPT1AP50416 773 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 SNX17Q15036 470 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 KCNV1Q6PIU1 500 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 LENG1Q96BZ8 264 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 USP26Q9BXU7 913 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 PXMP2Q9NR77 195 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-216ENST00000439475 MROH7Q68CQ1 1323 aa12.08□□□□□ -0.48
MCF2L-216ENST00000439475 GOLGA8AA7E2F4 631 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 GOLGA8BA8MQT2 603 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 KPNA6O60684 536 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 SYN1P17600 705 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 FSCN1Q16658 493 aaKnown RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 CCSAPQ6IQ19 270 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 RAB11FIP4Q86YS3 637 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
MCF2L-216ENST00000439475 FBXL16Q8N461 479 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 COL20A1Q9P218 1284 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
MCF2L-216ENST00000439475 CENPFP49454 3210 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 LCTP09848 1927 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 A0A0U1RQG5 324 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 MYADML2A6NDP7 307 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 ADCY6O43306 1168 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 CCND2P30279 289 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 BMP8BP34820 402 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 METAP2P50579 478 aaKnown RBP eCLIP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 BEX3Q00994 111 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 COL9A3Q14050 684 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 SLC35G1Q2M3R5 365 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 BRF1Q92994 677 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 TOX2Q96NM4 488 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 PDCD2LQ9BRP1 358 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 PSTPIP2Q9H939 334 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
MCF2L-216ENST00000439475 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
MCF2L-216ENST00000439475 hCG_1984214I3L0E3 225 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 ARVCFO00192 962 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 PIK3CDO00329 1044 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 OPLAHO14841 1288 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 STAM2O75886 525 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 GH1P01241 217 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 CLTBP09497 229 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 CPA1P15085 419 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 TLE2Q04725 743 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 APOBRQ0VD83 1088 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 PGM5Q15124 567 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 GNPTABQ3T906 1256 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
MCF2L-216ENST00000439475 CXCL17Q6UXB2 119 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 VSIG10LQ86VR7 867 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 ZNF713Q8N859 430 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-216ENST00000439475 GLT8D2Q9H1C3 349 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 EHMT1Q9H9B1 1298 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
MCF2L-216ENST00000439475 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-216ENST00000439475 SPDYE3A6NKU9 549 aa12.04□□□□□ -0.48
MCF2L-216ENST00000439475 CTAGE5O15320 804 aa12.04□□□□□ -0.48
MCF2L-216ENST00000439475 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
MCF2L-216ENST00000439475 MYL3P08590 195 aa12.04□□□□□ -0.48
MCF2L-216ENST00000439475 TGFB3P10600 412 aa12.04□□□□□ -0.48
MCF2L-216ENST00000439475 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-216ENST00000439475 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms