RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SIP14410 1827 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 GJB5O95377 273 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
CSTF3-203ENST00000438862 NDUFB10O96000 172 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 PTPROQ16827 1216 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 DUSP28Q4G0W2 176 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
CSTF3-203ENST00000438862 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 PRSS33Q8NF86 280 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
CSTF3-203ENST00000438862 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
CSTF3-203ENST00000438862 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 KPNA6O60684 536 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 MYL3P08590 195 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 IRS1P35568 1242 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 TKFCQ3LXA3 575 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 HERC4Q5GLZ8 1057 aaPredicted RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 PABPC5Q96DU9 382 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 MRPL38Q96DV4 380 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
CSTF3-203ENST00000438862 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 VPS9D1Q9Y2B5 631 aa13.33□□□□□ -0.28
CSTF3-203ENST00000438862 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 ABHD14A-ACY1A0A1B0GW23 586 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 PRKAB2O43741 272 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 GFRA3O60609 400 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 BCAR3O75815 825 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 PTGS1P23219 599 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
CSTF3-203ENST00000438862 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 TMEM63BQ5T3F8 832 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 EEPD1Q7L9B9 569 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 FBXO16Q8IX29 292 aaPredicted RBP13.32□□□□□ -0.28
CSTF3-203ENST00000438862 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
CSTF3-203ENST00000438862 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 EDAQ92838 391 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 POP1Q99575 1024 aaKnown RBP13.32□□□□□ -0.28
CSTF3-203ENST00000438862 SYNPO2Q9UMS6 1093 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
CSTF3-203ENST00000438862 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
CSTF3-203ENST00000438862 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 SCN10AQ9Y5Y9 1956 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 NCK2O43639 380 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 DEFB103AP81534 67 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
CSTF3-203ENST00000438862 BANK1Q8NDB2 785 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 MORC4Q8TE76 937 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 MKL1Q969V6 931 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 CLIP2Q9UDT6 1046 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 INSL6Q9Y581 213 aa13.31□□□□□ -0.28
CSTF3-203ENST00000438862 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
CSTF3-203ENST00000438862 LOC102724159A0A0B4J2E5 919 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 MBD4O95243 580 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 IKBKEQ14164 716 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 PWP2Q15269 919 aaKnown RBP13.3□□□□□ -0.28
CSTF3-203ENST00000438862 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 PBXIP1Q96AQ6 731 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 TRERF1Q96PN7 1200 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 MKNK2Q9HBH9 465 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 RAD50Q92878 1312 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 ZDBF2Q9HCK1 2354 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 TRIOO75962 3097 aa13.3□□□□□ -0.28
CSTF3-203ENST00000438862 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSTF3-203ENST00000438862 CXCL10P02778 98 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 TRIM27P14373 513 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 SELPP16109 830 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 TCF15Q12870 199 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 GPNMBQ14956 572 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
CSTF3-203ENST00000438862 PTGISQ16647 500 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 EP400NLQ6ZTU2 488 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 AACSQ86V21 672 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 ERC1Q8IUD2 1116 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
CSTF3-203ENST00000438862 ZNF454Q8N9F8 522 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
CSTF3-203ENST00000438862 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms